Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2884 ATGGTCCTCTTGCTTGTTCTAACTCTGTTTTCTCTTCTGGGTTCCTCTGTTTTCTCTTCCTCTTTGCTCAGTGATTTCCATGCCATAGTCTCACTTCAAGAACAATTCCAATTTCCAGACCCATTTCTAAGCTCTTGGAATTGGAATTCTTCGAATTCAAACTCAGTTTGTTCATGGGTGGGAATTCAATGCCACCGAGGGCGAGTTGTGGCTGTGGATTTGACAGATTTGAACCTTTCTGGTTCTATTTCTTCTTCAATTTCAAAACTTGATCGGCTCACCCACCTTTCCCTCTCTGGAAATAACTTCACAGGAAGCATTGAGATTGAGATCACCAATTTGAGAAGCCTTCAGTTTCTGAACATCTCAAACAACCAGTTCAGTGGAAACTTAGATTTGAACTTCTCCGCCATGGCAGACTTGGAGGTTCTTGATGCCTATGACAACAACTTCACAGGCCTGCTTCCTATTGGGGTTCTGGGTTTGAAGAAGCTCAGGTACCTGGACCTTGGTGGGAACTATTTCTATGGAAAAATCCCCGAAAGCTATGGAAATTTAGTGGGGCTGGAATATCTTTCTCTAGCAGGAAATGATCTCCGAGGGAAAATCCCAGGTGAGTTAGGCAATCTCACCAACTTGAAGGAGATTTACTTGGGCTATTACAATTCCTTTGAAGGTGGGATTCCAATGGAGTTTGGAAAATTGGTAAATTTAGCTCACATGGATCTCTCTAGTTGTGATTTGGATGGTCCAATTCCAAGAGAATTAGGGAATTTGAAGGAACTTGACACTCTTTACCTTCATATTAATCAAATTTCAGGTTCTTTACCAAGGGAGCTGGGCAATTTGACTAACTTGGTGAACCTTGACGTTTCAAGCAATGCACTTTCAGGGGAAATCCCATTTGAGTTCATCAACCTCAAGAACCTTATACTTCTCAATCTCTTCTTAAACAAATTCCACGGGTCAATACCAGACTACCTGGCAGAATTTCCTAATTTAGAAACACTTGGCCTCTGGATGAACAACTTCACAGAAGAAATCCCCCAGAATCTTGGCTCAAATGGGAGGCTGCAAGTTCTTGATTTGTCCTCTAATAAGCTCACTGGTACAATCCCACCTCATCTTTGTTCCTCAAACCAGCTTAGGATTCTGATTCTCCTAAATAACTTCCTCTTTGGGTCCATTCCTGAAGGTCTTGGAACATGTTACAGTCTCACTAGAGTAAGGTTAGGACAAAACTACCTTAATGGTAGCATTCCAAATGGCTTTCTTTACCTTCCTAAGCTGAATCTAGCAGAGTTTCAGAACAACTTCTTATCGGGAACTTTGCCGGAAAATCACAATAGTTCCTCTCAGCCTGTGAACTTAGTACAACTTAACTTGTCAAACAACGACTTGTCTGGTCTTTTGCCAAGTTCCCTCTCAAATTTCTCTTCCATTCAGATCCTTTTGCTTAGTGGGAACCAATTCTCTGGCCCCATTCCTTCCTCCATTGGCGGATTATCCCAAGTTCTGAAACTTGATCTCAGTAGAAACTCATTATCTGGAGAAATCCCACCTGCAATCGGTAATTGTGTTCATCTTACTTACATTGACATGAGCCAGAACAACCTCGTTGGTTCAATCCCATCTGAGATTTCCAACATCCACATTTTGACCTACTTGAACTTGTCAAGAAACCATTTGAACCAAACTATTCCAAAGTCAATTAGCACTATGAGAAGCCTCACCATTGCTGATTTCTCTTTCAATGAATTCTCCGGAAAGCTTCCGGAATCTGGGCAGTTCGCCTTCTTCAACGCCTCCTCTTTCGCTGGAAATCCCCAACTCTGCGGTTCCATCCTCAACAATCCTTGCAACTTTACCACATTCACAACCCCACTTAGGAAAGGCACTGCATATTTCAAGCTCATCTTCGCTTTTGGCCTATTGATTTGCTCCTTAGTCTTTGCTTCTGCAGCCATAATAAAGGCAAAATCTTTCAGAAAGAATGGCCCTGGTTCATGGAAGATGACTTCATTCCAGAAGCTGGAGTTCACAGTTTCCGACATCCTCGAATGCGTCGAAGAAGGCAATGTGATCGGAAGAGGAGGAGCTGGGGTTGTTTATCATGGGAAAATGGCAAGTGGGGTGGAAATCGCAGTGAAGAAACTTCTGGGTCTTGGCGCGAACCGCCATGACCATGGGTTTAAAGCAGAGATTGAAACACTGGGCAACATAAGGCACAGAAACATAGTGAGACTCCTCGCTTTCTGCTCCAACAACGAGACCAACCTTCTCGTCTACGAGTTCCTGAGAAATGGGAGCCTAGGCGAGGCATTGCATGGAGGGAAGAAGCAAAACAGTGCGTTTCTGGGGTGGGATTTGAGGTGCAAGATCGCGGTTGATTCGGCTCAAGGGCTTTGCTATCTTCACCATGATTGCTCGCCGATGATCGTTCATCGTGACGTGAAATCAAACAATATCTTGTTGAACTCTAAGTTTGATGCCCACGTGGCGGATTTTGGGCTCGCGAAGTTCTTGGTGGATGGTGGCGGCGCGTCGGAGTACATGTCTGCTATTGCTGGGTCTTACGGCTACATTGCTCCTGGTATGAGAAGACTAGACATATTCCTTTATCGTAGCTATGTTTGCATGGATGAAGGATCTGATACGCCAGGGCGGCGACCAATCGGAGAATTAGAGGAAGGGATGGACCTTGTGCAATGGTGCAGGAAGACAACAAACGGTGGTAACAAAGAAGAAGTAATGAACATAATAGATGTGAGGCTGAAAGTGGTGCCTAAAGAGGAAGCTATGCACATATTCTTCATTGCCATGTTGTGCTTACAAGAAAATAGTGTGGGGAGACCCACAATGAGGGAAGTAGTTCAAATGCTTTTAGAATTCTCTCGCCCCTTGTCACTTGACCAATCTTCTTCCTCGTATTCCTTTTCTACTACTCATCCACCATCCAAAATTCTTGAGAAATCCGCACCTTGTCCTTCCACTTTTAATAAAGACCTTTTGGTTTAA 3018 0.4377 MVLLLVLTLFSLLGSSVFSSSLLSDFHAIVSLQEQFQFPDPFLSSWNWNSSNSNSVCSWVGIQCHRGRVVAVDLTDLNLSGSISSSISKLDRLTHLSLSGNNFTGSIEIEITNLRSLQFLNISNNQFSGNLDLNFSAMADLEVLDAYDNNFTGLLPIGVLGLKKLRYLDLGGNYFYGKIPESYGNLVGLEYLSLAGNDLRGKIPGELGNLTNLKEIYLGYYNSFEGGIPMEFGKLVNLAHMDLSSCDLDGPIPRELGNLKELDTLYLHINQISGSLPRELGNLTNLVNLDVSSNALSGEIPFEFINLKNLILLNLFLNKFHGSIPDYLAEFPNLETLGLWMNNFTEEIPQNLGSNGRLQVLDLSSNKLTGTIPPHLCSSNQLRILILLNNFLFGSIPEGLGTCYSLTRVRLGQNYLNGSIPNGFLYLPKLNLAEFQNNFLSGTLPENHNSSSQPVNLVQLNLSNNDLSGLLPSSLSNFSSIQILLLSGNQFSGPIPSSIGGLSQVLKLDLSRNSLSGEIPPAIGNCVHLTYIDMSQNNLVGSIPSEISNIHILTYLNLSRNHLNQTIPKSISTMRSLTIADFSFNEFSGKLPESGQFAFFNASSFAGNPQLCGSILNNPCNFTTFTTPLRKGTAYFKLIFAFGLLICSLVFASAAIIKAKSFRKNGPGSWKMTSFQKLEFTVSDILECVEEGNVIGRGGAGVVYHGKMASGVEIAVKKLLGLGANRHDHGFKAEIETLGNIRHRNIVRLLAFCSNNETNLLVYEFLRNGSLGEALHGGKKQNSAFLGWDLRCKIAVDSAQGLCYLHHDCSPMIVHRDVKSNNILLNSKFDAHVADFGLAKFLVDGGGASEYMSAIAGSYGYIAPGMRRLDIFLYRSYVCMDEGSDTPGRRPIGELEEGMDLVQWCRKTTNGGNKEEVMNIIDVRLKVVPKEEAMHIFFIAMLCLQENSVGRPTMREVVQMLLEFSRPLSLDQSSSSYSFSTTHPPSKILEKSAPCPSTFNKDLLV 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2884 1005 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 189 961 - -
Glsi11g2884 1005 MobiDBLite consensus disorder prediction 971 993 - -
Glsi11g2884 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 223 328 - -
Glsi11g2884 1005 SUPERFAMILY Protein kinase-like (PK-like) 678 961 IPR011009 -
Glsi11g2884 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 335 624 - -
Glsi11g2884 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 658 765 - -
Glsi11g2884 1005 Gene3D Ribonuclease Inhibitor 328 623 IPR032675 -
Glsi11g2884 1005 Gene3D Phosphorylase Kinase; domain 1 654 765 - -
Glsi11g2884 1005 ProSiteProfiles Protein kinase domain profile. 689 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2884 1005 SMART LRR_typ_2 550 574 IPR003591 -
Glsi11g2884 1005 SMART LRR_typ_2 455 477 IPR003591 -
Glsi11g2884 1005 SMART LRR_typ_2 502 526 IPR003591 -
Glsi11g2884 1005 SMART LRR_typ_2 356 379 IPR003591 -
Glsi11g2884 1005 SMART LRR_typ_2 331 355 IPR003591 -
Glsi11g2884 1005 SMART LRR_typ_2 186 210 IPR003591 -
Glsi11g2884 1005 SMART LRR_typ_2 90 114 IPR003591 -
Glsi11g2884 1005 SMART LRR_typ_2 259 283 IPR003591 -
Glsi11g2884 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Glsi11g2884 1005 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Glsi11g2884 1005 SUPERFAMILY L domain-like 352 613 - -
Glsi11g2884 1005 FunFam Leucine-rich repeat receptor-like kinase 24 134 - -
Glsi11g2884 1005 SMART serkin_6 689 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2884 1005 Pfam Leucine Rich Repeat 456 478 IPR001611 GO:0005515
Glsi11g2884 1005 Pfam Leucine Rich Repeat 357 377 IPR001611 GO:0005515
Glsi11g2884 1005 MobiDBLite consensus disorder prediction 971 987 - -
Glsi11g2884 1005 Pfam Protein kinase domain 690 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2884 1005 Gene3D Ribonuclease Inhibitor 24 135 IPR032675 -
Glsi11g2884 1005 Gene3D Transferase(Phosphotransferase) domain 1 766 978 - -
Glsi11g2884 1005 SUPERFAMILY RNI-like 72 424 - -
Glsi11g2884 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 135 222 - -
Glsi11g2884 1005 Gene3D Ribonuclease Inhibitor 136 221 IPR032675 -
Glsi11g2884 1005 Gene3D Ribonuclease Inhibitor 222 323 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2884 Glsi-ChrGlsi11 22915151 22921021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2884 15 993 Receptor kinase-like Gene Family AT5G65700 52.386 0.0 977
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi11g2884 Pkinase 3e-29 CL0016