Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2869 ATGGCCTTAATCTTCAGAAAGCGTCTAAGCAAAACAGATGTGAATCACAGACTCTCATTCCCATCCAGAAACCTTCATCATCTTCCACCCTTTCCACAAGGGCTCTACTGGATCCCTCTCAGGGTTAGGTTCGGGTCTGACTGGCGTGATCTCCTCTGCGTCACTCGCAGAACTGGTTACAGAAAACCAGTCATCACTGGAGGGTGGGCTCGGATTGCTAAAGAGAAAGATTTGAAGGTAGGTGACATTCTCATGTTCTATCATGACAGGAATCACGGTCATTACAGAATCAAGGTCAAGAGAAGCATCAATTTATTGGGTCAAGATATTGCAGCCAGAGTTGTATAA 348 0.454 MALIFRKRLSKTDVNHRLSFPSRNLHHLPPFPQGLYWIPLRVRFGSDWRDLLCVTRRTGYRKPVITGGWARIAKEKDLKVGDILMFYHDRNHGHYRIKVKRSINLLGQDIAARVV 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2869 115 ProSiteProfiles B3 DNA-binding domain profile. 38 103 IPR003340 GO:0003677
Glsi11g2869 115 Pfam B3 DNA binding domain 6 101 IPR003340 GO:0003677
Glsi11g2869 115 CDD B3_DNA 4 101 IPR003340 GO:0003677
Glsi11g2869 115 SUPERFAMILY DNA-binding pseudobarrel domain 4 97 IPR015300 -
Glsi11g2869 115 Gene3D - 1 107 IPR015300 -
Glsi11g2869 115 SMART B3_2 5 103 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2869 Glsi-ChrGlsi11 22537372 22537719 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Glsi11g2869 B3 2.4e-09 CL0405