Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2865 ATGGTCGAGTCAAGGAGAATTGAATTTTTAGTGCTTGGAGTTGCTTCATCCACCATGGCTTTGCCAGCTTGCTCGCCGGAGCAATTGGCCCAGTTATTCGGTGCCAACACCACAAACGCCACAGCTGCAGCAAACTTCATCTGTGACAGATTTACTGCTGTCACCAACAAGTTCTCCGACACCACCTACGCCGTTGACAACACCTACCTCCTGTTCTCTGCTTACCTTGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGCGCTGGCTCCGTCCGTGCCAAGAACACCATGAACATCATGCTCACTAATGTGCTCGACGCCGCCGCCGGTGGCCTCTTCTACTACCTATTTGGCTTCGCTTTCGCTTTTGGAGGCCCCTCAAATGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAGGAAATCCCCTCTCCCAACTTTGACTACAGCTATTTCCTTTACCAATGGGCTTTTGCTATCGCCGCTGCCGGCATCACTAGCGGCTCCATCGCCGAGCGAACCCAGTTCGTCGCTTACCTCATCTACTCTTCCTTCTTAACTGGGTTCGTTTACCCTGTTGTATCTCATTGGTTCTGGTCCGCTGACGGTTGGGCTAGCGCCACCAACTCGGATCTCCTATTCGGAACCGGAGTCATCGATTTCGCCGGGTCGGGTGTGGTCCACATGGTGGGTGGCATCGCTGGTTTGTGGGGCGCGCTTATTGAGGGACCCAGAATTGGTCGATTCGACCATTCGGGTCGACCCATCGCGCTTCGTGGCCACAGTGCCTCTTTGGTCGTTCTCGGTACTTTCTTGCTTTGGTTCGGATGGTACGGGTTCAACCCGGGTTCGTTTACAAAGATTTCGACTGCTTACGTTTCTGGAAACTTCTACGGACAGTGGAGCGCAGTGGGCAGAACGGCCGTGACGACCACGCTAGCCGGTTGCACCGCCGCGCTGACAACTCTTTTTGGCAAGAGGATTCTCTCGGGTCATTGGAATGTGACGGACGTGTGCAACGGGTTGTTGGGGGGGTTTGCCGCCATCACTTCAGGGTGCTCCGTGGTGGAGCCGTGGGCTGCAATCATTTGCGGGTTCGTGTCGGCGGTGGTGTTGATTTGCTGCAACAAACTGGCGGAGAAGGCGAAGTACGATGACCCATTGGAGGCTGCGCAACTGCACGGCGGGTGCGGCGCGTGGGGGATAATCTTCACAGCGTTGTTCGCGAAGCAGGAGTATGTGAATCAGGTGTACCCAGGTAAACCGGACCGACCACACGGGTTGTTCATGGGTGGCGGTGGAAAGTTACTGGGAGCTCACGTGATCCAGATTTTGGTAATTATCGGGTGGGTCACTGCCACCATGGGTCCTCTTTTCTTTGTTCTTCACAAGCTCAAACTCTTGCGGATCTCTACCGAGGACGAATTGGCGGGTATGGATATGACCCGACACGGAGGATTTGCTTATGCATATGAAGACGAATCACATAAGCATGGGATTCAGTTGAGAAAAATTGAACCAAATGCTTCCACTCCCACCATAGATTAG 1548 0.542 MVESRRIEFLVLGVASSTMALPACSPEQLAQLFGANTTNATAAANFICDRFTAVTNKFSDTTYAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGGPSNGFIGRHFFGLKEIPSPNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASATNSDLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGRPIALRGHSASLVVLGTFLLWFGWYGFNPGSFTKISTAYVSGNFYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAIICGFVSAVVLICCNKLAEKAKYDDPLEAAQLHGGCGAWGIIFTALFAKQEYVNQVYPGKPDRPHGLFMGGGGKLLGAHVIQILVIIGWVTATMGPLFFVLHKLKLLRISTEDELAGMDMTRHGGFAYAYEDESHKHGIQLRKIEPNASTPTID 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2865 515 Pfam Ammonium Transporter Family 69 489 IPR024041 GO:0008519|GO:0016020|GO:0072488
Glsi11g2865 515 FunFam Ammonium transporter 47 504 - -
Glsi11g2865 515 PANTHER AMMONIUM TRANSPORTER 37 485 - -
Glsi11g2865 515 Gene3D Ammonium transporter AmtB like domains 44 509 IPR029020 -
Glsi11g2865 515 SUPERFAMILY Ammonium transporter 63 470 - -
Glsi11g2865 515 ProSitePatterns Ammonium transporters signature. 220 245 IPR018047 GO:0008519|GO:0016020|GO:0072488
Glsi11g2865 515 NCBIfam ammonium transporter 66 489 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2865 Glsi-ChrGlsi11 22451694 22461573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2865 23 513 Inorganic Solute Cotransporters AT4G13510 81.414 0.0 821