Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2864 ATGGAGCTATCAGATTTGCAAAACAACAAGAAGAGCAGCAATAACAACACACCCAGTCATCCCCACCACCACCACCATCATCATCGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAAAAGCAGCAGTTATCTTCGTCGCAGGTTGTGCACCCTTTTGACCATGGCAGAGGAGGAGGGGGAGGAGGAGGACCCTTTATCATGGGCTCCATCCCCATCCAAGCTGGCCTCACTCGGGGTGCAACAACTGCTTCCACCTCTTCTTCTTCTTCGAATTCTTCGTCTTCTTCATCCTCGGCTTCTGCTTCTGCGTCTGTCTCTACTGCTCCCCCTCACCTCATTGATGCCTCTCTAGCCATCGCCACCAGATCTGAGCCACACCCATCATCCCGATCCGGACCTGTCGTCGTCGATTCTAACAAGAAAGCCCAAATTGAACAACAATTATCAATCTCTACAACGACGACGACGGCGGGGGCGGGGGCGGTGGCTGCGAACCCGCCTAAGCGATCTACGAAGGATAGACACACGAAGGTCGATGGTCGCGGCCGGAGAATTCGAATGCCGGCGACGTGTGCGGCTAGGGTTTTTCAGTTGACCAGAGAATTGGGTCACAAGTCCGACGGAGAGACGATTGAGTGGCTGCTACAGCAGGCGGAGCCGGCAATCATCGCTGCCACCGGGACCGGGACTATCCCAGCAAATTTCTCGACTCTCAACGTGTCGCTTCGGAGCAGTGGGTCTACTCTTTCAGCTCCGCCGTCGAAGTCAGCTCCTCATACGTTTCATGGAGCTCTAGGACTCGCTCATCATCACCCTTACGAAGAGGCTTTCCACCATTCGGCTTTGTTAGGGTTTCATCCTCACCACCACCAACAACATCATCATCAACCTCAGCCTCATCTAATGACTGCAGATCAAATCGCAGAAGCGCTTCCAAGTGGCGGCGGAGGCGCCGGGGAGAGCGGTGGTGAATCGACCGAGAGCTATATGAGAAAACGCTTCAGAGAAGATTTATTCAAAGACGAAGATAATCAACAAGCACAAAATGAAAGCGGAGGTGGGAATTCTCCCAAGGTATTCAAAAGCAACTTACAACAACAATTGCCAAAGCAACAAGAAGCAGGAGGATCTTCAGGCCTTCTTCGCTCTTCAAATATTCTCCCCGCCACGGCCATGTGGGCTGTGGCACCAGCTCCTACCAGTGGTGGTGCTGCTGCAGGTAGTACATTCTGGATGCTAACAGCTGGTGGGGCTGGTGTCCCAGCTGTACCCACTGGCTCTTCTGGGTCTGGTTCCGCAGGAGGGTCAGAGACCCAGATGTGGCCATTTCCAACGGCACAAGCAAGTAGTGGGAATACCTTACAGGCCCCATTACAGTTCATGCCGAGGTTCAATCTTCCTGGTAATCTTGAATTTCAAGGTGGTCGAGGAGGGGGTCCTTTGCAATTGGGGTCTATGTTGATGCCTCAGCAACCATCGCAGCATTTGGGGCTTGGCATGTCCGAGTCGAATCTGGGTATGTTGGCTGCTTTGAATGCTTATTCTAGAGCTGGTTTGCATTTGAATTCTGACCAGCAGAATCATCCATTGGAGCATCAACATCATCATCAACAGCAACATCAACATCAGCAAGCAACTGATAGTGGAGAAGAAGGTCCTAATAGTTCTGATCAATGA 1701 0.5215 MELSDLQNNKKSSNNNTPSHPHHHHHHHRQQQQQQQQQQQQQQQQQQKQQLSSSQVVHPFDHGRGGGGGGGPFIMGSIPIQAGLTRGATTASTSSSSSNSSSSSSSASASASVSTAPPHLIDASLAIATRSEPHPSSRSGPVVVDSNKKAQIEQQLSISTTTTTAGAGAVAANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHGALGLAHHHPYEEAFHHSALLGFHPHHHQQHHHQPQPHLMTADQIAEALPSGGGGAGESGGESTESYMRKRFREDLFKDEDNQQAQNESGGGNSPKVFKSNLQQQLPKQQEAGGSSGLLRSSNILPATAMWAVAPAPTSGGAAAGSTFWMLTAGGAGVPAVPTGSSGSGSAGGSETQMWPFPTAQASSGNTLQAPLQFMPRFNLPGNLEFQGGRGGGPLQLGSMLMPQQPSQHLGLGMSESNLGMLAALNAYSRAGLHLNSDQQNHPLEHQHHHQQQHQHQQATDSGEEGPNSSDQ 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2864 566 MobiDBLite consensus disorder prediction 17 31 - -
Glsi11g2864 566 MobiDBLite consensus disorder prediction 1 113 - -
Glsi11g2864 566 MobiDBLite consensus disorder prediction 83 113 - -
Glsi11g2864 566 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 93 531 IPR005333 GO:0003700
Glsi11g2864 566 Coils Coil 27 54 - -
Glsi11g2864 566 MobiDBLite consensus disorder prediction 535 549 - -
Glsi11g2864 566 ProSiteProfiles TCP domain profile. 179 233 IPR017887 -
Glsi11g2864 566 MobiDBLite consensus disorder prediction 32 57 - -
Glsi11g2864 566 MobiDBLite consensus disorder prediction 532 566 - -
Glsi11g2864 566 MobiDBLite consensus disorder prediction 550 566 - -
Glsi11g2864 566 MobiDBLite consensus disorder prediction 1 16 - -
Glsi11g2864 566 MobiDBLite consensus disorder prediction 157 187 - -
Glsi11g2864 566 Pfam TCP family transcription factor 178 306 IPR017887 -
Glsi11g2864 566 MobiDBLite consensus disorder prediction 251 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2864 Glsi-ChrGlsi11 22449836 22451536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2864 176 512 TCP Transcription Factor Family AT1G35560 46.450 3.12e-64 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi11g2864 TCP 2.5e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2864 11 22449836 22451536 Glsi11g2864 11 22449836 22451536 ECH