Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2863 ATGATGATGAAAATGGTGGAGTTTGAGTACAAAGAGCTTGAAAACGTTACGAATAACTTTAACCACACTATGCTTCTTGGTAAAGGAAGCCATGGATTGGTGTATAAAGGTATCATCTTCAAAGATAATAGATTGATAGATGTTGCTATAAAGAAGCCATCGCAAGGTCTTCAATATCTTCAAGATAACTCCAAGCTCGAGAACGAAATCCGAGTTCTCTCTGCACTGCGACCAAACCCTTTTGTTCTTGGCCTTCTGGGTACCAGCAATGACGACAAGCACAAGCTCCTCGTCATGGAGCTCATGCCGAATGGTTCGCTCCACGACTGGCTCCACGTGGCAGAGACCCCGCCGCCGTGGCCCAAGCGAGTGGAAATTGCCATGCAAATCGCTAGAGCGGTGCAGTTTCTCCACGAAGGGAAGCCTCAGGTGATCCACAGAGACGTCAAGTCCACCAACGTCCTGTTCGATTCTAACTATAACGCCAAGCTCGCAGATTTCGGACTCGCTCTCTTTCAACCCGACTCGCTGAGTCAACCCGCCGGGACGATTGGGTATCTCGACCCGTCTTACACCAACCCCAGTAAACTCAGCACTAAGAACGACGTTTTCAGCTTCGGGGTTGTGTTGTTGGAGATTTTCACCACCAGAAAAGCCATCGACATGCAGAAAACGCCGTGCTCCGTCGTGGAGTGGGCGGTGCCGTTTATCGAAGACGAACTGTTCGACGAAATTCGTGACTCGAGAACTGCGTTGCCTGCGTGTATGGCAAGCACGATCGTTCAGTTTCTGCGCATGGCGGCACGTTGTGTGTCGTCAAACGAAGATGCGCGTCCTTCGATAGGAGAGGTGGTGGAAGAAATGGAGAGTTGCATCGTTGAACGAGTCAGAGTTCCCATTTGGATCACGAGAGTGATGAAGAGAATGGCTCGCTTGAGGAAGCGAGGAAAAGTGGGAAAGGTTGGGGTTGATGCTCCCATGTCTACTGGGAAGCTTTTGTTGAAAGAGGTTTTGGCTGCTGATGTAACTTTGAGTTGA 1038 0.4971 MMMKMVEFEYKELENVTNNFNHTMLLGKGSHGLVYKGIIFKDNRLIDVAIKKPSQGLQYLQDNSKLENEIRVLSALRPNPFVLGLLGTSNDDKHKLLVMELMPNGSLHDWLHVAETPPPWPKRVEIAMQIARAVQFLHEGKPQVIHRDVKSTNVLFDSNYNAKLADFGLALFQPDSLSQPAGTIGYLDPSYTNPSKLSTKNDVFSFGVVLLEIFTTRKAIDMQKTPCSVVEWAVPFIEDELFDEIRDSRTALPACMASTIVQFLRMAARCVSSNEDARPSIGEVVEEMESCIVERVRVPIWITRVMKRMARLRKRGKVGKVGVDAPMSTGKLLLKEVLAADVTLS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2863 345 Pfam Protein kinase domain 22 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2863 345 SMART serkin_6 20 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2863 345 PANTHER OS01G0253100 PROTEIN 5 290 - -
Glsi11g2863 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Glsi11g2863 345 Gene3D Phosphorylase Kinase; domain 1 1 101 - -
Glsi11g2863 345 SUPERFAMILY Protein kinase-like (PK-like) 10 299 IPR011009 -
Glsi11g2863 345 Gene3D Transferase(Phosphotransferase) domain 1 102 298 - -
Glsi11g2863 345 ProSiteProfiles Protein kinase domain profile. 20 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2863 345 ProSitePatterns Protein kinases ATP-binding region signature. 26 52 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2863 Glsi-ChrGlsi11 22435543 22436580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2863 8 315 Receptor kinase-like Gene Family AT3G59420 38.080 7.11e-58 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Glsi11g2863 Pkinase 8.4e-38 CL0016