Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2850 ATGCCTTTAATCTTCAGAAAGTGCCTGAGCAAAACAGATGTGAATCACAGACTCTCATTCCCATCTAGAAAGATTCACCATCTTCCACCCTTTCCAGAAGGGGTCAACTGGGTCACTCTCAGGATTAGGTTCGGGTCTGAACGAGGCAGGCGAAAGCTCCTCTGCTTCACTCGCAGAAATGGTTATAGAAAACCAGTCATCGATGGAGGGTGGGCTCAGATTACTCAAGAGAAAAATTTGAAGGTAGGTGACTTACTCATGTTCTATAAGGGCAGGAATCATGGCCATTACAGAATCAAGGTCGAGAGAAAAATAAGGTTGTGGGGTCAAGATATAGTAGCCAGAATTGTATGA 354 0.4435 MPLIFRKCLSKTDVNHRLSFPSRKIHHLPPFPEGVNWVTLRIRFGSERGRRKLLCFTRRNGYRKPVIDGGWAQITQEKNLKVGDLLMFYKGRNHGHYRIKVERKIRLWGQDIVARIV 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2850 117 Gene3D - 2 107 IPR015300 -
Glsi11g2850 117 CDD B3_DNA 4 103 IPR003340 GO:0003677
Glsi11g2850 117 SUPERFAMILY DNA-binding pseudobarrel domain 3 99 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2850 Glsi-ChrGlsi11 22192738 22193091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2850 3 112 RAV Transcription Factor Family AT3G25730 25.397 6.02e-06 42.0