Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2842 ATGGCCTTAATCTTCAGAAAGCGTCTGAGCAAAACAGATGTGAATTTAAGATTGTCAGTGCCACCCAATACACTTCACCATCTTCCACCCTTTCCAGAGGGGCTCAACCAGGTCACTCTCAGGGTTAAGTTCGGGTCTGAACGAGGCAGGCGAGAGCTCCTCTGCACCGCTCGCAGAACTGGTTACAGAAAACCTGTCATCACTGGGGGGTGGGTTCAGATTGCTCAAGAGAAAGGTTTGAAGGTAGGCGACTTGCTCATGTTCTATCATGACAGCAATCATGGTCATTACAGAATCGAGGTCAAGAGAAGCATCAGGTTATGGGGTCAAGATGTTGAAGCCAGAGTTGTATAA 354 0.4802 MALIFRKRLSKTDVNLRLSVPPNTLHHLPPFPEGLNQVTLRVKFGSERGRRELLCTARRTGYRKPVITGGWVQIAQEKGLKVGDLLMFYHDSNHGHYRIEVKRSIRLWGQDVEARVV 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2842 117 SMART B3_2 5 105 IPR003340 GO:0003677
Glsi11g2842 117 Gene3D - 2 107 IPR015300 -
Glsi11g2842 117 Pfam B3 DNA binding domain 7 103 IPR003340 GO:0003677
Glsi11g2842 117 CDD B3_DNA 4 103 IPR003340 GO:0003677
Glsi11g2842 117 SUPERFAMILY DNA-binding pseudobarrel domain 4 97 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2842 Glsi-ChrGlsi11 21863969 21864322 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Glsi11g2842 B3 8.1e-08 CL0405