Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2840 ATGGCCTTAATCTTCTCAAAGCCTCTGAGCCAAACAGATGTGAATCACCGATTCTCGTTCCCATCCAGAAAACTTCACCACCTACCTCCCATTCCACGAGGACTCAACCGAGTCACTCTCAGGGTTAGGTTCGGGTCTGAAGGAGACATGCGAGAGCTCATCTGCGCCACTCGCAGAACTGGACGTTACAGAAAACCAGTCCTCATCGGGGGGTGGAATCAGATTGCTCGAGAGAAAGGTTTAAAGGTAGGTGACTTACTCATGTTCTATCATGACATGAATGATGATCATTACAAAATCGAGGTCAAGAGAAGCATCAGGCTCTGGCGTCAAGATGTTGAAGTCAATGTTGAATAA 357 0.4706 MALIFSKPLSQTDVNHRFSFPSRKLHHLPPIPRGLNRVTLRVRFGSEGDMRELICATRRTGRYRKPVLIGGWNQIAREKGLKVGDLLMFYHDMNDDHYKIEVKRSIRLWRQDVEVNVE 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2840 118 CDD B3_DNA 4 104 IPR003340 GO:0003677
Glsi11g2840 118 Pfam B3 DNA binding domain 7 103 IPR003340 GO:0003677
Glsi11g2840 118 SMART B3_2 5 106 IPR003340 GO:0003677
Glsi11g2840 118 Gene3D - 2 111 IPR015300 -
Glsi11g2840 118 SUPERFAMILY DNA-binding pseudobarrel domain 4 97 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2840 Glsi-ChrGlsi11 21806885 21807241 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Glsi11g2840 B3 2.4e-07 CL0405