Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2836 ATGGCCTTAATCTTCAGAAAGCGTCTGAGCCGAACAGACGTGAATCGTAGACTCTCATTCCCATCCAAAACACTTCACCATCTTCCACCCTTTCCAGAAGGGCTCAACCAGGTCACTTTCAGGGTTAAGTTCGGGTCTGAACGAGGCAGGCGAGAGCTCCTCTGCGCCACTCGCAGAACTGGTTACAGAAAACCAGTAATCATTGGGGGGTGGGCTCAGATTGCGCAAGAGAAAGATTTGAAGGTAGGTGACTTCCTCATGTTCTATCATGACAAGAATCATGGTCATTACAGAATCGAGGTCAAGAGAAGCATCAGGTTCTGGGGTCAAGATGTTGAAGCTCTTCTAATGGATCTTAAATCTTTGGCTTAA 372 0.4704 MALIFRKRLSRTDVNRRLSFPSKTLHHLPPFPEGLNQVTFRVKFGSERGRRELLCATRRTGYRKPVIIGGWAQIAQEKDLKVGDFLMFYHDKNHGHYRIEVKRSIRFWGQDVEALLMDLKSLA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2836 123 SMART B3_2 5 105 IPR003340 GO:0003677
Glsi11g2836 123 Gene3D - 1 110 IPR015300 -
Glsi11g2836 123 Pfam B3 DNA binding domain 5 103 IPR003340 GO:0003677
Glsi11g2836 123 CDD B3_DNA 4 103 IPR003340 GO:0003677
Glsi11g2836 123 SUPERFAMILY DNA-binding pseudobarrel domain 4 97 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2836 Glsi-ChrGlsi11 21701781 21702292 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Glsi11g2836 B3 7.2e-08 CL0405