Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2827 ATGCCATGCCTTGTAACGTTATGGGAACTATTTGTCCCCTTGTGCTGTGCTGTTAGAGCACTTTTTGTGTGTGCGGATTTGGTTTGTCTGAGAGAGAGAGGTTGGACTACAAAGGGACAGACGAACCCTAGGAGAGAGAAAGTGTGCTTTGATCTCAAGCCTTTTTCGCATTGCATTCTTGATCTCGAATCTTCAATCTGCAAAGGTATAATTTCTGCTTCGATGGCAAATTCAAAGAGTTCACCAGGCATCAGAAATTTTATGTATTCTGGAAAGCATGCTTTACTTCCTCCTAAAAGTCCATTTCCTAGTGTATCTGGAGCATATGCTGATTATGTCCCAAATCCTGCAATTGGTTCCAAGGTTATTCAGAAACCTAGAGAGGGAAACAAACACCATCAACGGACTTCATCTGAGAGCTTTGTCATAGAGGAGCAACCTTCTTGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTCCGTAGGGGCAGTCATAGGCGTTCATCAAGTGATTCTTTTGCATACTTAGATACACTTAATGTTTCTAACATTGGCTATACAGATCAGGATGAGTATAAGAATTTGATATCTAAATCATGTCGGGCATCACAAGACTTTGATTATGGCAAAGATGCTCGTCATTTACCGATGTATGCTGAAATCAAGTCAACAAAACAGAAAAATAGGGCATGGGACTCTTCTCTAAGTGCTGTGTCACATCCTGGTGGTGTTCCCTCTGGCAGGGATAATGTTGCTTTTCAGAGTTCAGGATTGTCATGTACGCCACATGAAGCAGATGAGGTTCCATCAAGTGCTAATGAAAAGCAGGATTCAGTAGAATCTGGTTCACAGGATACTAAAGTATCTCCTGAAAGAAAGGATGGTTCACATGTAAAGACATATGCTTCTGAAACAGATACGAAACGTGCTAAACAGCAATTTGCTCAACGGTCACGGGTCCGTAAACTTCAATACATAGCTGAGCTGGAAAGAAATGTACAAGCTTTACAGGCAGAAGGGTCTGAAGTATCAGCTGAGGTTGAATTTCTTAATCAACGGAATATTATCCTGAGCATGGAGAATAAAGCCCTTAAGCAACGTTTAGAAAGTTTAGCACAAGAGAAGCTTATCAAACACTTGGAGCAGGAAGTACTGGAAAAAGAGATTGGGAGATTGCGTGCCTTGCATCAGCAGCAGCAGCAACCACAACCGCAACAGCAACAACAACGGCAACCATCTGGCAGCCTTCGACGCACAAAGAGCAGAGACCTTGAATCCCAATTTGCAAATCTTTCTTTAAAGCACAAGGATACCAATTCAGGGCGTGACCCTGTGACAGGTCCACTCCGTATATAG 1359 0.4268 MPCLVTLWELFVPLCCAVRALFVCADLVCLRERGWTTKGQTNPRREKVCFDLKPFSHCILDLESSICKGIISASMANSKSSPGIRNFMYSGKHALLPPKSPFPSVSGAYADYVPNPAIGSKVIQKPREGNKHHQRTSSESFVIEEQPSWLDDLLNEPETPVRRGSHRRSSSDSFAYLDTLNVSNIGYTDQDEYKNLISKSCRASQDFDYGKDARHLPMYAEIKSTKQKNRAWDSSLSAVSHPGGVPSGRDNVAFQSSGLSCTPHEADEVPSSANEKQDSVESGSQDTKVSPERKDGSHVKTYASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAEVEFLNQRNIILSMENKALKQRLESLAQEKLIKHLEQEVLEKEIGRLRALHQQQQQPQPQQQQQRQPSGSLRRTKSRDLESQFANLSLKHKDTNSGRDPVTGPLRI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2827 452 MobiDBLite consensus disorder prediction 225 307 - -
Glsi11g2827 452 CDD bZIP_plant_RF2 307 356 IPR044759 GO:0003700|GO:0006355
Glsi11g2827 452 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 84 434 IPR044797 -
Glsi11g2827 452 MobiDBLite consensus disorder prediction 396 452 - -
Glsi11g2827 452 Gene3D - 310 357 - -
Glsi11g2827 452 SMART brlzneu 305 364 IPR004827 GO:0003700|GO:0006355
Glsi11g2827 452 Coils Coil 320 375 - -
Glsi11g2827 452 SUPERFAMILY Leucine zipper domain 316 358 IPR046347 GO:0003700|GO:0006355
Glsi11g2827 452 MobiDBLite consensus disorder prediction 287 307 - -
Glsi11g2827 452 MobiDBLite consensus disorder prediction 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2827 Glsi-ChrGlsi11 21481421 21487198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2827 145 379 bZIP Transcription Factor Family AT2G42380 31.923 3.95e-23 96.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2827 11 21481421 21487198 Glsi11g2827 11 21481421 21487198 ECH