Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2816 ATGGAGAAGTACGAGCTGGTGAAGGATATAGGATCTGGGAATTTCGGGGTGGCCAGGCTTATGCGCAACAAAGAGACCAAGGAGCTCGTTGCCATGAAATACATTGTACGAGGCCACAAGATTGATGCGAATGTAGCGAGGGAAATAATAAACCATAGATCTCTTCGCCACCCTAATATAATTCGGTTCAAGGAGGTGGTTTTGACTCCTACTCATCTTGCAATAGTTATGGAGTATGCGGCTGGAGGAGAGCTCTTTGAGCGAATTTGCAGTGCTGGAAGATTCAGTGAAGATGAGGCTAGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAACTACTGTCATTCTATGCAAATTTGCCACCGAGACTTGAAGCTGGAGAACACCTTGTTAGATGGCAGCCCAGCCCCACGACTGAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTGCTTCATTCAAGGCCTAAATCAACAGTGGGAACTCCAGCCTACATTGCACCAGAGGTTCTTTCACGTAGAGAATATGATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTGACTCTTTATGTGATGCTGGTGGGAGCATACCCATTTGAGGACCAAGAGGATCCTAGAAACTTCAGGAAAACCATAAATCGAATTATGTCTGTTCAATACAAGATCCCAGACTATGTTCACATATCTCAAGACTGTAGGCATCTGCTATCACACATTTTTGTGGCAAATCCAGCTAGGAGAATAACCATTAAAGAAATCAAGTCCCACCCATGGTTCTTAAAGAACTTGCCTAGAGAATTGACAGAAATGGCTCAAGCTGTCTACTACAGGAAAGAAAACCCAACCTTTTCTCTTCAGAGTGTGGAAGACATAATGAAAATTGTTGAAGAGGCCAAAGCTCCACCTTCAGCCTCCAGGTCAATTGGAGGGTTTGGCTGGGGAGGGGAAGAAGAAGAAGAAGAAGAGACAAATGAAGATGCAAATGCTGAGGAGGAAGAAGATGAGTATGAAAAGAAAGTCAAGGAGGCACAGGCTACCGGTGATGTTCCCATCAGTTAA 1062 0.4407 MEKYELVKDIGSGNFGVARLMRNKETKELVAMKYIVRGHKIDANVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVNYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPRNFRKTINRIMSVQYKIPDYVHISQDCRHLLSHIFVANPARRITIKEIKSHPWFLKNLPRELTEMAQAVYYRKENPTFSLQSVEDIMKIVEEAKAPPSASRSIGGFGWGGEEEEEEETNEDANAEEEEDEYEKKVKEAQATGDVPIS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2816 353 MobiDBLite consensus disorder prediction 315 334 - -
Glsi11g2816 353 SUPERFAMILY Protein kinase-like (PK-like) 2 294 IPR011009 -
Glsi11g2816 353 Coils Coil 316 347 - -
Glsi11g2816 353 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Glsi11g2816 353 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Glsi11g2816 353 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Glsi11g2816 353 PANTHER SERINE/THREONINE KINASE 2 308 - -
Glsi11g2816 353 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Glsi11g2816 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Glsi11g2816 353 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Glsi11g2816 353 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2816 353 CDD STKc_SnRK2 3 259 - -
Glsi11g2816 353 MobiDBLite consensus disorder prediction 301 353 - -
Glsi11g2816 353 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2816 353 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2816 Glsi-ChrGlsi11 21405151 21408737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2816 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 43.704 2.14e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Glsi11g2816 Pkinase 1.4e-71 CL0016