Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2810 ATGGAGAGGAATTTTAGTTCATATAATCATCACATGGCCTCTAGCTTGAAGAACGGTGACCAGAAACACCAGCACGATCACACAGCACAGTCTCATCTTGAAGAAGATAACATGTCTCCATCTTTCAATCTGCGGAATATCTCAAAGCTCATCCTTCCACCTCTGGGTGCTTCAAGTTATAACCAGAACCCAGTAGACTCAAAAGGGTGGATCATATCTCCTATGGATTCAAAATACAGGTGGTGGCAGGGTTTCATGGTGCTTCTGGTGGGTTATTCGGCGTGGGTTTATCCCTTTGAGGTCGCTTTCCTGCACTCCTCTCTAAACAGGGAAGTGTACATTGTGGACAATGTCGTTGATATTTTCTTCGCCGTTGATATTGTTCTCACATTCTTCGTAGCTTTCATTGATCCAAGAACTCAGCTATTAGTTCGAAACTCCAAAACGATTGCTACCAGGTACCTTTCAACATGGTTCGTGATGGACGTAGCATCAACAATTCCATACGAGGCAACAGGGTATTTGATTACAGGCAAACACAAAGTGGGCCTTGTTTACTACCTTCTGGGCCTGCTCAGATTTTGGCGACTCAGGCGCGTCAAGCAATTCTTCACCAGGCTTGAGAAAGACATCAGGTTCAGCTATTTCTGGATCCGATGTGCTAGGCTTCTCTCTGTGACACTATTTTCAGTTCATTGTGCTGGGTGCCTCTACTACCTACTAGCCGATCGCTATCCTCATCAAGGAAAGACATGGATTGGAGCAGTGATCCCAAATTTCCGACAGACAAGCCTGAGGATCAGATACATCTCAGCCATGTACTGGTCCATCACCACCATGACCACCGTCGGCTACGGCGACCTCCATGCTGTGAACACCCAGGAAATGATATTCATCATCTTCTACATGCTCTTCAACCTTGGCCTAACTGCTTACTTGATTGGCAACATGACAAACCTAGTTGTTGAAGGAACTCGTCGTACCATGGAATTTAGAAATAGCATTGAAGCGGCGTCAAATTTTGTGGGCCGAAACCGTTTGCCTCCAAGGTTAAGAGAGCAGATCCTGGCTTATATGTGTTTGAGATTTAAGGCTGAGAGCTTGAATCAGCATCAGCTTATTGAACAGCTACCAAAATCCATTTGCACAAGCATCTGCCAGCATTTGTTCTTTCCAACTGTCGAGAAAGTCTATCTTTTCAAAGATGTCTCGAGAGAAATTCTTTTGTCCTTGGTTGCAAAAATGAAGGCAGAGTATTTACCACCCAGGGAGGATGTGATCATGCAAAATGAATCTCCAGATGATGTCTACATTATAGTATCAGGAGAAGTGGAGATCATTGATTGTGTAATGGAGAAAGAGAAACTTTTAGGGACTTTACGAACAGGGGACATGTTTGGAGAAGTTGGTGCGCTTTGTTGCAGACATCAGAACTTTACCTACAGAACCAAGACTCTCACACAGCTCTTGAGGCTCAAAACCAATGCTCTCATAGAAGCAATGCAGACTAAAAAAGAAGACAATATACAAATACTCAAGAACTTCCTGCAGCATTTCAAGCAACTGAAGGATCTGAGTATTAGAGATTTAATGGTGGAGAGTGGAGAAGATGAGGACCCAAACATGGCTGTGAATTTGCTAACTGTGGCTAGTACAGGCAATGCTGCTTTTCTTGAGGAGCTACTCAAGGCAGGTTTAGATCCTGACATTGGAGACTCAAAAGGAAAAACCCCATTGCACATAGCTGCAACAAATGGCCATGAACAGTGTGTAAAGGTCTTGCTAAGGCATGCATGCAACCTACTTATAAGAGACATCAACGGAAACACTGCATTATGGGATGCTATAGAATCAAAACACCATTCCATATTCCGAATCCTCTACCAACTTTCCGCCCTCTCTGATCCACAAACAGGAGGTGATCTCCTATGCACAGCAGCAAAAAGAAACGATCTAATAGTGATGAATGAGCTTCTAAAGCAAGGGTTGAACGTAGACTCGAAAAATCACCATGGTTTAACAGCAATCCAGATTGCCATGGCAGAAAACCATGTGGAAATGGTTCAGCTTCTTGTCATCAATGGAGCAGATGTTTCTGGCATTCATACCCATAACTTCTCTGCTTCAGCTTTGAACGACATGCTGCGAAAGCGCGAAAGCGGACATCAGATCATGGTTCATGAAAGTACAAACACTGAGTTTGTGTCAAGGGAATGTGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGAGTAAGAGTTGGGGAAGATGTAATAGAGGTAAGTGTCCAAGAGTAAGTATATATAGAGGTCATCCTGTAATGAGAAGAGAGAAAGGTTGCAGGGAAGCTGGGAAGCTCATCAGGATTCCTAATTCATATGAGGAGCTCAAGAGAATTGCAGGTGAAAAATTTGGGTTTGAAGCAAAAGATGCAATGGTGACAAATGAAGAAGGAGCAGAAATAGACTCCATTGATGTGATCAGAGATAACGATAAGCTTTTCATTGTTGAATAG 2511 0.4333 MERNFSSYNHHMASSLKNGDQKHQHDHTAQSHLEEDNMSPSFNLRNISKLILPPLGASSYNQNPVDSKGWIISPMDSKYRWWQGFMVLLVGYSAWVYPFEVAFLHSSLNREVYIVDNVVDIFFAVDIVLTFFVAFIDPRTQLLVRNSKTIATRYLSTWFVMDVASTIPYEATGYLITGKHKVGLVYYLLGLLRFWRLRRVKQFFTRLEKDIRFSYFWIRCARLLSVTLFSVHCAGCLYYLLADRYPHQGKTWIGAVIPNFRQTSLRIRYISAMYWSITTMTTVGYGDLHAVNTQEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLREQILAYMCLRFKAESLNQHQLIEQLPKSICTSICQHLFFPTVEKVYLFKDVSREILLSLVAKMKAEYLPPREDVIMQNESPDDVYIIVSGEVEIIDCVMEKEKLLGTLRTGDMFGEVGALCCRHQNFTYRTKTLTQLLRLKTNALIEAMQTKKEDNIQILKNFLQHFKQLKDLSIRDLMVESGEDEDPNMAVNLLTVASTGNAAFLEELLKAGLDPDIGDSKGKTPLHIAATNGHEQCVKVLLRHACNLLIRDINGNTALWDAIESKHHSIFRILYQLSALSDPQTGGDLLCTAAKRNDLIVMNELLKQGLNVDSKNHHGLTAIQIAMAENHVEMVQLLVINGADVSGIHTHNFSASALNDMLRKRESGHQIMVHESTNTEFVSRECEEEEEEEEEESKSWGRCNRGKCPRVSIYRGHPVMRREKGCREAGKLIRIPNSYEELKRIAGEKFGFEAKDAMVTNEEGAEIDSIDVIRDNDKLFIVE 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2810 836 SUPERFAMILY Voltage-gated potassium channels 74 322 - -
Glsi11g2810 836 CDD CAP_ED 399 512 IPR000595 -
Glsi11g2810 836 Pfam Ankyrin repeats (3 copies) 550 629 IPR002110 GO:0005515
Glsi11g2810 836 PRINTS EAG/ELK/ERG potassium channel family signature 116 126 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi11g2810 836 PRINTS EAG/ELK/ERG potassium channel family signature 269 286 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi11g2810 836 PRINTS EAG/ELK/ERG potassium channel family signature 295 306 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi11g2810 836 PRINTS EAG/ELK/ERG potassium channel family signature 313 322 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi11g2810 836 PRINTS EAG/ELK/ERG potassium channel family signature 127 136 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi11g2810 836 FunFam Potassium channel KAT3 81 323 - -
Glsi11g2810 836 Pfam Cyclic nucleotide-binding domain 419 503 IPR000595 -
Glsi11g2810 836 FunFam Potassium channel KAT2 387 523 - -
Glsi11g2810 836 SMART cnmp_10 399 516 IPR000595 -
Glsi11g2810 836 ProSiteProfiles Ankyrin repeat region circular profile. 574 605 - -
Glsi11g2810 836 Gene3D - 543 719 IPR036770 -
Glsi11g2810 836 SUPERFAMILY Ankyrin repeat 507 707 IPR036770 -
Glsi11g2810 836 SUPERFAMILY cAMP-binding domain-like 326 518 IPR018490 -
Glsi11g2810 836 PANTHER POTASSIUM CHANNEL AKT1 43 835 IPR045319 GO:0005249|GO:0006813
Glsi11g2810 836 Gene3D - 82 322 - -
Glsi11g2810 836 ProSiteProfiles cAMP/cGMP binding motif profile. 399 518 IPR000595 -
Glsi11g2810 836 Pfam Ion transport protein 80 328 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Glsi11g2810 836 ProSiteProfiles Ankyrin repeat region circular profile. 671 699 - -
Glsi11g2810 836 Pfam KHA, dimerisation domain of potassium ion channel 762 834 IPR021789 -
Glsi11g2810 836 Gene3D Jelly Rolls 366 539 IPR014710 -
Glsi11g2810 836 MobiDBLite consensus disorder prediction 16 33 - -
Glsi11g2810 836 ProSiteProfiles KHA domain profile. 763 836 IPR021789 -
Glsi11g2810 836 SMART ANK_2a 671 700 IPR002110 GO:0005515
Glsi11g2810 836 SMART ANK_2a 541 570 IPR002110 GO:0005515
Glsi11g2810 836 SMART ANK_2a 492 524 IPR002110 GO:0005515
Glsi11g2810 836 SMART ANK_2a 574 603 IPR002110 GO:0005515
Glsi11g2810 836 SMART ANK_2a 638 667 IPR002110 GO:0005515
Glsi11g2810 836 SMART ANK_2a 607 637 IPR002110 GO:0005515
Glsi11g2810 836 MobiDBLite consensus disorder prediction 13 35 - -
Glsi11g2810 836 ProSiteProfiles Ankyrin repeat profile. 574 606 IPR002110 GO:0005515
Glsi11g2810 836 PRINTS Ankyrin repeat signature 687 701 IPR002110 GO:0005515
Glsi11g2810 836 PRINTS Ankyrin repeat signature 575 590 IPR002110 GO:0005515
Glsi11g2810 836 ProSiteProfiles Ankyrin repeat profile. 671 703 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2810 Glsi-ChrGlsi11 21329142 21340097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2810 1 579 Ion Channels AT4G22200 72.556 0.0 862
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2810 11 21329142 21340097 Glsi11g2810 11 21329142 21340097 ECH