Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2808 ATGAAATTGAATGAACTGGAGAACCTTGGCTGCACCATTTTGCATGAAGTGGATGCTTGTACATTGAGCATCCTCTTCTCCAAGAAAAGCTTTTTCATCAAATCATCTTCAACTTTCCTCTCTCTGGGTTCTTATCCAGACAGCATTGCTTGCTCCAAAATAAAGAAAATGGTTTTGGATCTGGAAACTGTGAAGCAAATAATTGATTCAGACATCCATGATGTCAATTTAAATAGTCATAACAGTGTTTACTTGAATCTGAGGCTGGCAATTATCCAATACGAGCTTTCCCAACTCATTCAAATCAACAATCCACAGGCTCAGGTGAACCAAAACTATCAGACCCAGGAGACAATTGCAGTAGCAGCTGGTTTGGCAGATGATGGCATCTCGAGAATTTGCACACACCGCTGTTGCCAGACAATGAAAACGCCATTGTGGCGTAGGGGTCCCCTTGGTCCCAAGACTCTCTGCAATGCATGTGGCATAAAATTCAGAAAACAGCTAGCGAAGGACCCAAATACTGGAGTTGATTGGCTTCAACTATGA 549 0.4226 MKLNELENLGCTILHEVDACTLSILFSKKSFFIKSSSTFLSLGSYPDSIACSKIKKMVLDLETVKQIIDSDIHDVNLNSHNSVYLNLRLAIIQYELSQLIQINNPQAQVNQNYQTQETIAVAAGLADDGISRICTHRCCQTMKTPLWRRGPLGPKTLCNACGIKFRKQLAKDPNTGVDWLQL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2808 182 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 101 168 - -
Glsi11g2808 182 CDD ZnF_GATA 133 167 IPR000679 GO:0006355|GO:0043565
Glsi11g2808 182 ProSiteProfiles GATA-type zinc finger domain profile. 139 173 IPR000679 GO:0006355|GO:0043565
Glsi11g2808 182 Pfam GATA zinc finger 139 168 IPR000679 GO:0006355|GO:0043565
Glsi11g2808 182 SMART GATA_3 128 178 IPR000679 GO:0006355|GO:0043565
Glsi11g2808 182 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 126 174 - -
Glsi11g2808 182 Gene3D - 130 175 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2808 Glsi-ChrGlsi11 21288503 21294441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2808 128 166 C2C2-Gata Transcription Factor Family AT1G08010 71.795 1.29e-14 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Glsi11g2808 GATA 1.1e-13 CL0167