Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2806 ATGGCGGGGCAGGGCGGGGCAGTTCTCACTCTCAGACTGAGTGGTCGGAGCATGGGTTCCCTCGTCTTCATCGCCTTGTTACTCTGCCTAGTGCCGTGCTCGCAGTCTCAGGACCTTGACTCTTTCTTCAGTAATCGTAAAATATTGCCTCTCGTTACCAAATCTGCTACCTCCTATGCTGTCATTTTTGATGCTGGTAGCACCGGCACCCGCGTTCATGTCTTCCACTTCAACAAGACCTTGGATCTCCTTCCCATTGCTCCATCTCAATATGAGTTTTACTCCAAGGTTAGGCCGGGTTTGAGTTCATACGCCGAGGACCCGCAAAAGGCTGCAGAATCTATTATCCCGCTTCTGAGAAAAGCGGAAGCCGTTGTTCCTAAGACCTCCCGCTCCCGCACCCCAGCCCGACTTGGAGCAACTGCTGGTTTGAGAGCTTTGCAAGGCGATGCCGCTGAACGCATCTTGGAAGCGGTTAGGGATTTGCTTGAGAACAGCAGCTTTGACGTTAAGAGTGACGAAGTTGCTATTATTAGTGGAACCCAAGAAGGATTTTATCTATGGGTGACGGTCAACTATCTATTGAACAAGTTGGGAGATGATTACTCAAAGACAGTAGGAGTGGTTGATCTCGGAGGTGGGTCTGTTCAAATGGCGTATGCCATCTCAGAAGCCGATGCTGCAAAGGCTCCAAATGCAACAAATGGACAGGACCCTTACATAACAAAGATCTACCTCAAGGGAACCTTATATTACATATACGTTCACAGTTATTTGCACTATGGCAAGGAAGCATCTCGTGCAGAGATTTTAAAGGTTTCGGGTGAATCTGACAACCCTTGTATTTTATCTGGCTTCAAAGGGACTTACAAATATGGCAATGGGAAGTACAATGCCTCTGCCCCGCCTACTGGTTCGAGCTTCAATGAATGCAGAAACACAGTTCTCAAGGCTCTCAAAGCCGATGAGCCATGTCCATATAAGAAATGCACTTTTGGAGGGATATGGAACGGTGGAGGGGGAGATGGACAGAGCCATCTTTACCTTGCCTCGTCTTTCTATTACCTTGCCACCGACGCTGGTTTTGCTGATGAAAATAAAGCCAGCGACAAAGTTCGGATAATTGATTACAAGATTACAGCTGAGCTTGCCTGTAAAACATCATACACGGAAGCCAATTCCACTTTTCCACAAGTTTACGCGGATTCGCTTCCATATTTATGTATGGATCTGGTATATCAATACACCTTGTTAGTCGATGGTTTTGGTCTAGATCCATGGCAGGTGGTGACGGTGGTGGACGAAATTGAGTATAAGGGGTCGTCTGTGGATGCATCCTGGGCCCTAGGCAGTGCCATTGAAGCCATTTCATCTCGGCCTAAATTTGACCGATTCATGTCCGTTATGTAG 1410 0.4752 MAGQGGAVLTLRLSGRSMGSLVFIALLLCLVPCSQSQDLDSFFSNRKILPLVTKSATSYAVIFDAGSTGTRVHVFHFNKTLDLLPIAPSQYEFYSKVRPGLSSYAEDPQKAAESIIPLLRKAEAVVPKTSRSRTPARLGATAGLRALQGDAAERILEAVRDLLENSSFDVKSDEVAIISGTQEGFYLWVTVNYLLNKLGDDYSKTVGVVDLGGGSVQMAYAISEADAAKAPNATNGQDPYITKIYLKGTLYYIYVHSYLHYGKEASRAEILKVSGESDNPCILSGFKGTYKYGNGKYNASAPPTGSSFNECRNTVLKALKADEPCPYKKCTFGGIWNGGGGDGQSHLYLASSFYYLATDAGFADENKASDKVRIIDYKITAELACKTSYTEANSTFPQVYADSLPYLCMDLVYQYTLLVDGFGLDPWQVVTVVDEIEYKGSSVDASWALGSAIEAISSRPKFDRFMSVM 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2806 469 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 22 458 IPR000407 GO:0016787
Glsi11g2806 469 Gene3D Exopolyphosphatase. Domain 2 179 441 - -
Glsi11g2806 469 CDD NBD_sugar-kinase_HSP70_actin 61 220 - -
Glsi11g2806 469 FunFam Apyrase 1 179 437 - -
Glsi11g2806 469 Gene3D - 59 453 - -
Glsi11g2806 469 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 178 193 IPR000407 GO:0016787
Glsi11g2806 469 Pfam GDA1/CD39 (nucleoside phosphatase) family 53 459 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2806 Glsi-ChrGlsi11 21262870 21268896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2806 53 458 Calmodulin-binding Proteins AT3G04080 54.902 3.63e-153 442