Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2763 ATGGAGGAGGCCAAACGCAAGCGTTTGAAGCCCAAACTTCAGCGCCGAAACGCCAGGAAGAACATCGATTACCAACTGCCCGCCTCTGCTTCTTTCGATGACGACGACGACGCCTCGCACAACCCCCGAACTGGCTCCCTCGACCTTTCCCCTTCTCTGGAGCACCAAACCAGCTTCAGGGTCAAGGGCGTGGATGGTGAATTCGACCTAATTTTTCGCAGTTTAGGGCTTACTGGACCCGAAGACTTTGCGATTCCTACTGCAGATTGGGAGGCTCAGAAGGCTCGCTCTCGCATCAATCGCATGCCGAAGGTGGGAGATGGAATTTCAGCTAAATTTGAAAGTGGGGTTGGAATTAATGGTGATATAGAGCTGAAAGATGAGAGCTTTCAAGTTCAGCCTAGTGATGAAGGGGAGGGTAGGAAGATTGATGTTTCTTCTAATTCTAAAGCTTTGGGGTCAAATAAAGATGGGGGTAGAGGAATCAAGGGTGTTAGGCCTCCCGTTCTTGCGTCGCCGCCGGTCATTATGAGGCCGATTGTAGATTCACCAATTAACCAAGGGGACGTTAGTTCTTCGCGTGAAGATAAAGTTAGGGGCCTCGAAGAAAATGAGGATATTGTTCCAGATAATGATGATGATGATGATGATAATGGTGGTGGTGACAAGGCTACTGCTGTGGTTGACGAGTCGGTTTATAATGTCTCACCAAATGGGTCGTTTAGACGCACTTTCTCCTCGTGGCAAAAGGGGGAGATTTTAGGAAAGGGGTCATTTGGAACGGTGTATGAAGGCTTTACAAATGATGGATTCTTTTTTGCTGTAAAGGAGGTGTCTTTGCTGGATCAAGGAAGCCAGGGCAAACAGAGTATTCTTCAACTTCAGCAGGAAATATCTCTTTTGAGTCAGTTTGAACACAAGAACATAGTTCGATATCTTGGCACAGACAAGGATGAAAGTACACTATATATCTTCCTTGAGCTTTTAACAAAAGGGTCATTGGCAAATCTATATCAGAAGTATCGTTTAAGGGATTCTCAAGTTTCTGCATACACACGGCAGATTTTAAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAATGTGCTAATATATTGGTTGATGCAAGTGGATCAGTAAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGATGTTAAATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTTAATTTAAGGAACCGTGGCTATGGACTAGCAGCCGATATATGGAGTTTAGGATGTACAGTTTTGGAAATGTTGTCAAGACAGCCTCCTTACTCTCAATTGGAAGGGATGCAAGCATTATTTCGAATTGGCAGGGGTGAACTTCCACCTATTGCTGAATCAATATCAAAAGATGCCCGAGATTTTATTCTCAAATGCTTACAAGTTAACCCAAATAAACGGCCAACTGCAGCTCAGTTGTTGGATCATCCATATGTGAAGAGACCACTTCTATCTCTCTTAAGTCCTGCTTCACCGCTTATTAATAATGTTAGGAAAAGTTTAGTAGATATGTGGATATGTGCTGGAGTTGGCCCTTACAATCTTCAGTTGGTTGGTTGTAATCATGTTAATCCACCATGCCGTTCTACAGTCTCGACTGTGGCTAGGGTTGCCGCTTGTACTTGCACTAGTCTCAGGCCATGGTGGCAGGACATGCAAAAGTAA 1731 0.446 MEEAKRKRLKPKLQRRNARKNIDYQLPASASFDDDDDASHNPRTGSLDLSPSLEHQTSFRVKGVDGEFDLIFRSLGLTGPEDFAIPTADWEAQKARSRINRMPKVGDGISAKFESGVGINGDIELKDESFQVQPSDEGEGRKIDVSSNSKALGSNKDGGRGIKGVRPPVLASPPVIMRPIVDSPINQGDVSSSREDKVRGLEENEDIVPDNDDDDDDNGGGDKATAVVDESVYNVSPNGSFRRTFSSWQKGEILGKGSFGTVYEGFTNDGFFFAVKEVSLLDQGSQGKQSILQLQQEISLLSQFEHKNIVRYLGTDKDESTLYIFLELLTKGSLANLYQKYRLRDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLSRQPPYSQLEGMQALFRIGRGELPPIAESISKDARDFILKCLQVNPNKRPTAAQLLDHPYVKRPLLSLLSPASPLINNVRKSLVDMWICAGVGPYNLQLVGCNHVNPPCRSTVSTVARVAACTCTSLRPWWQDMQK 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2763 576 Pfam Protein kinase domain 249 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2763 576 MobiDBLite consensus disorder prediction 1 51 - -
Glsi11g2763 576 ProSitePatterns Protein kinases ATP-binding region signature. 254 276 IPR017441 GO:0005524
Glsi11g2763 576 MobiDBLite consensus disorder prediction 131 227 - -
Glsi11g2763 576 ProSiteProfiles Protein kinase domain profile. 248 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2763 576 FunFam Mitogen-activated protein kinase 1, putative, expressed 246 513 - -
Glsi11g2763 576 SUPERFAMILY Protein kinase-like (PK-like) 235 529 IPR011009 -
Glsi11g2763 576 Gene3D Transferase(Phosphotransferase) domain 1 246 521 - -
Glsi11g2763 576 SMART serkin_6 248 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2763 576 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 145 507 - -
Glsi11g2763 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 367 379 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2763 Glsi-ChrGlsi11 20806662 20815142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2763 12 505 MAP Kinase Kinase Kinase AT4G08500 46.516 1.64e-144 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Glsi11g2763 Pkinase 2.3e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2763 11 20806662 20815142 Glsi11g2763 11 20806662 20815142 CCT
Glsi11g2763 11 20806662 20815142 Glsi11g2763 11 20806662 20815142 ECH