Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2762 ATGGAAGAAGTCACAGCGATGCAGAAAATTGATCTCTCTTTGAAGATTAATACTAAACAACAACAAGAAGATGATAAGCAAGAAATGGCAACACAAGTGCAGGACAAGGAAGAAGCTGATGAAATAGATGATGATGATGATGCATCAATGGTAGAAATATCTTTCCAAGAAAATACTAAAACAAGAGAGTTAAGTGACTTACAAATGGAGACAGATCGCATGAAAGAAGAAAACAGAGCTTTGAGGAAAGTTGTGGAGCAAACAATGAAAGATTACTATGATCTTCAAATGAAATTAGCGGCCATCCAGCATAACCACAAGAACAAGGATCCTGAAATTTCACTCTCCCTTCAACCCAATGCAAACGCTAGAGGAGAAGAAGCACCAACAAATCCTCAAAGAGCAGCTCCATCGCCAATGAACAGTGACGACGATACTATAAAGGAGGCTGGATTGGGATTATCACTGAGGTTGCAGACCAGTTCAAGTCAAAAAGAAGAAGAAAATAAGAAAGAATTGGCAAGTTTTACATCAGTTCAGAACAAGGTACCTCGGACTCATCATGATAATTTGCCTGGTTTCAATTCCCAAGCTGCTTTGCCTCCTAATAGAAAGGCTAGGGTTTCGGTTAGAGCCAGATGTGAGGCTGCCACTTTGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATTGCAAAAGGAAACCCATGCCCTCGTGCCTATTATCGTTGCACTGTAGCCACAGGCTGCCCCGTTAGGAAACAGGTGCAAAGATGCCAAGAGGACATGTCCATACTAATTACAACTTATGAAGGAACACATAACCATCCACTCCCTGTGGGTGCAACTGCTATGGCTTCAACTACGTCTGCATCTGCCTCATTCATGTTACTAGATTCCAGCAACCCTTCCTCAGATGGAACCTCTAGTTTCACCCAAGCAACTCTTCCCAATTACAATTATGGCTTCCACTCTGCTTTAAACCCAGCTTCTAACATCAGAAGCATAAACCCTAATGACCCCTCGAAAGGAATTGTTCTTGATCTCACTAATAGCAGCTCCTCCAACTCAACATCCCAACCCAGATTTTCTTGGATGCCAAACAAACCAAGTCACCATAATGCTACTGCAACGTATAATTTTCCCAGCAGCAAAGTGGATGAGGAGAGGGTTTGGAGAGGAGGAGAAAATTACAAGGCACTAGTGGCTGATGATCATAATGTCTCTGCAATTGCCTCAGACCCTAAGTTTAGGGTTGCTGTTGCAGCAGCCATAACCTCACTCTTTAATAAAGAGAGCCGCCACACTAGGAATAATGGGCAAAATGGTAGCTCTAGCAGCAACAACAACTGGTTTATTGAGTCTCTCTCGGCAAATGCCAAACCGACTTGA 1395 0.4265 MEEVTAMQKIDLSLKINTKQQQEDDKQEMATQVQDKEEADEIDDDDDASMVEISFQENTKTRELSDLQMETDRMKEENRALRKVVEQTMKDYYDLQMKLAAIQHNHKNKDPEISLSLQPNANARGEEAPTNPQRAAPSPMNSDDDTIKEAGLGLSLRLQTSSSQKEEENKKELASFTSVQNKVPRTHHDNLPGFNSQAALPPNRKARVSVRARCEAATLNDGCQWRKYGQKIAKGNPCPRAYYRCTVATGCPVRKQVQRCQEDMSILITTYEGTHNHPLPVGATAMASTTSASASFMLLDSSNPSSDGTSSFTQATLPNYNYGFHSALNPASNIRSINPNDPSKGIVLDLTNSSSSNSTSQPRFSWMPNKPSHHNATATYNFPSSKVDEERVWRGGENYKALVADDHNVSAIASDPKFRVAVAAAITSLFNKESRHTRNNGQNGSSSSNNNWFIESLSANAKPT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2762 464 MobiDBLite consensus disorder prediction 345 370 - -
Glsi11g2762 464 Pfam WRKY DNA -binding domain 220 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g2762 464 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 31 446 IPR044810 GO:0003700
Glsi11g2762 464 MobiDBLite consensus disorder prediction 37 51 - -
Glsi11g2762 464 SMART WRKY_cls 219 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g2762 464 MobiDBLite consensus disorder prediction 122 203 - -
Glsi11g2762 464 MobiDBLite consensus disorder prediction 434 464 - -
Glsi11g2762 464 MobiDBLite consensus disorder prediction 16 65 - -
Glsi11g2762 464 FunFam probable WRKY transcription factor 31 204 281 - -
Glsi11g2762 464 Coils Coil 64 87 - -
Glsi11g2762 464 Coils Coil 19 39 - -
Glsi11g2762 464 MobiDBLite consensus disorder prediction 18 36 - -
Glsi11g2762 464 SUPERFAMILY WRKY DNA-binding domain 212 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g2762 464 ProSiteProfiles WRKY domain profile. 214 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g2762 464 MobiDBLite consensus disorder prediction 174 197 - -
Glsi11g2762 464 Gene3D WRKY domain 204 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2762 Glsi-ChrGlsi11 20800019 20803347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2762 17 367 WRKY Transcription Factor Family AT1G68150 46.006 2.32e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi11g2762 WRKY 1.7e-24 CL0274