Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2759 ATGGAAATCTCAGGCCCATTTGCTAAGAGCCAGAACACGGGGTTCCACCTCTATATAAAGGCAGAGGCTCAGCTCAAAACCCTGGATTGGTGGGAGGTTAGCACCCCGCCGCTAAGAGGGTTGTATTTTCTCCTTCGTGTAGCAGAAGTAGCAGAAAAAATGTCCCATAGGAAGTTTGAGCACCCAAGACATGGTTCACTTGGCTTTCTCCCTAGGAAACGTGCTTCTCGTCACCGTGGAAAAGTGAAGGCTTTCCCAACGGACAATCCCAGTAAACCATGCAGATTGACTGCCTTTATGGGTTACAAGGCTGGGATGACCCATATTGTAAGAGAAGTTGAGAAACCTGGATCAAAACTTCATAAGAAAGAGACCTGCGAGGCTGTTACATTAATTGAAACTCCTCCAATGGTTGTTGTTGGAGTTGTGGGATATGTGAAGACACCTCGAGGCCTTCGCACACTGAATACAGTTTGGGCTCAGCATTTAAGTGAGGAAGTTAGGAGGCGGTTCTACAAGAATTGGTGCAAGTCTAAAAAGAAAGCATTTACCAAGTATTCTAAGAGATTTGAAACTGAAGAAGGAAAGAAGGATATCCAAGCACAACTGGAGAAACTGAAAAAATATGCATCTGTCATCCGTGTTCTTGCACATACTCAGATAAGGAAGTTGAAGGGTCTAAAACAAAAGAAGGCTCATTTGATGGAGATCCAAGTCAATGGCGGGACAGTAGCACAGAAGGTGGACTATGCATACAGCTTTTTTGAGAAGCAAATCCCAGTGGAAGCTGTTTTCCAGAAAGATGAGATGATAGATATCGTTGGTGTGACCAAGGGTAAGGGTTACGAAGGTGTTGTAACTCGATGGGGTGTCACTCGCCTTCCTCGCAAGACACACAGAGGTCTAAGGAAGGTTGCTTGTATTGGTGCTTGGCACCCTGCCCGTGTTTCTTTCACAGTTGCCAGGGCTGGTCAGAATGGTTATCATCATCGTACTGAGTTGAATAAGAAGATCTACAAGGTTGGCAAGGCAGGGCAAGAGACACACACAGCCATCACTGAGTATGACAGGACCGAGAAGGATATTACTCCAATGGGTGGATTCCCTCATTATGGTGTAGTAAAGGATGATTATATTATGGTTAAAGGATGCTGTGTTGGACCCAAAAAGCGGGTAATCACCCTGCGTCAGTCGCTGCTCAAGCAGACTTCACGATTGGCCCTCGAAGAGATCAAACTCAAGTTTATCGACACTTCCTCCAAGTTTGGACACGGTCGCTTCCAGACCACTCAGGAGAAGCAGAAGTTTTATGGTCGGTTGAAGGCTTGA 1329 0.4582 MEISGPFAKSQNTGFHLYIKAEAQLKTLDWWEVSTPPLRGLYFLLRVAEVAEKMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPTDNPSKPCRLTAFMGYKAGMTHIVREVEKPGSKLHKKETCEAVTLIETPPMVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKRFETEEGKKDIQAQLEKLKKYASVIRVLAHTQIRKLKGLKQKKAHLMEIQVNGGTVAQKVDYAYSFFEKQIPVEAVFQKDEMIDIVGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKAGQETHTAITEYDRTEKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2759 442 FunFam 60S ribosomal protein L3 54 130 - -
Glsi11g2759 442 FunFam 60S ribosomal protein L3 136 260 - -
Glsi11g2759 442 FunFam Ribosomal protein L3 318 442 - -
Glsi11g2759 442 Gene3D Ribosomal protein L3, domain 3 54 327 IPR044892 -
Glsi11g2759 442 Gene3D - 136 260 - -
Glsi11g2759 442 SUPERFAMILY Translation proteins 57 423 IPR009000 -
Glsi11g2759 442 Gene3D Translation factors 97 438 - -
Glsi11g2759 442 ProSitePatterns Ribosomal protein L3 signature. 265 288 IPR019926 -
Glsi11g2759 442 FunFam 60S ribosomal protein L3 97 205 - -
Glsi11g2759 442 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 54 437 IPR045077 GO:0003735|GO:0005840|GO:0006412
Glsi11g2759 442 FunFam 60S ribosomal protein L3 279 327 - -
Glsi11g2759 442 Pfam Ribosomal protein L3 54 423 IPR000597 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2759 Glsi-ChrGlsi11 20768158 20772893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2759 54 440 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 87.080 0.0 707