Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2752 ATGAAGGATTTACGTAAAGTCATGAATGGGTTGAAACCAGTGGTGCTAATGGTGGTGGTGCAGATTGCATATGCTGCTGTCAATGTGCTTTACAAGCTCGCCATTAACGATGGAATGAGCATGAGGATTGCCACTGCTTACCGCCTCCTCTTTGCATCTGCTTTCACTAGTCCTCTTGCTCTTATTCTTGAAAGGAACAAGAGACCAAAGCTGACTTGGAGGGTGCTTTTTATGGCATTTCTTTGTGGCTTATTTGGGGGAAGTTTATTTCAAAACCTTTTCTATGAGGCTCTGGCTTTGACATCGGCAACATTTGTTTCGGCCATCTATAATCTTATTCCAGCCATCACCTTCGTCATGGCCATCTCCTGCGGCTTTGAAAGACTGAATCTGGGAGCAGCAGGAGGGAAGGCCAAGGTGTTAGGTACTATAATAGGGATTGGTGGGGCAATGCTGCTTACCTTCTTCAAAGGCGTAGAAATTGACATTTGGTCCTTCCACATTAACCTTCTGCACCCAAATCATCACCATGGCATGCTTCACTCAGATCACAGATTGCTAGGTGTTCTCTGTGCCATAGCCAGCTGCTTCTCCTTTGCTTTATGGTTCATCATCCAGGCTAAGATGAGTGGAGAATACCCAAGCCATCTCTCAAGCACAGCTTTAATGTCTACAATGGGAGCAATACAAGCCACTGCGTTTGCTCTTTGTGTGGAGAGAGATTGGAGGCAGTGGAAATTGGGTTGGGATGTTAGGCTTCTTGCTGTCTCTTTCTCGGGAATTGTGGCCTCCGGAATAGTGGTTATTATCATTGCATGGTGTATAAGGATGAGAGGCCCACTATTTGCTTCTGTTTTCAACCCTCTAATGCTTGTGCTTGTGGCCATTGCTGCTTCTTTGATGTTGAATGAGAACCTCTATTTAGGAAGTGTTTTCGGAGCTCTGCTGATTGTGTGTGGCTTATACATGATGCTATGGGGAAAGAGCAAAGAAATGAGAAAGATGACACAGTTAGTGCCATCAGAAATCACCCAAGAATCTGAAGCAATTGAGGTTGTTGTCTTGTCCACCATGGATAAAACTGACCATAGCAACCACAATAATACTATCAGCAATTCTCCCAAGGTTCATCGTGATTATGATTCATCAAAAATTGAGCATGAAGCTAGCTAA 1173 0.4416 MKDLRKVMNGLKPVVLMVVVQIAYAAVNVLYKLAINDGMSMRIATAYRLLFASAFTSPLALILERNKRPKLTWRVLFMAFLCGLFGGSLFQNLFYEALALTSATFVSAIYNLIPAITFVMAISCGFERLNLGAAGGKAKVLGTIIGIGGAMLLTFFKGVEIDIWSFHINLLHPNHHHGMLHSDHRLLGVLCAIASCFSFALWFIIQAKMSGEYPSHLSSTALMSTMGAIQATAFALCVERDWRQWKLGWDVRLLAVSFSGIVASGIVVIIIAWCIRMRGPLFASVFNPLMLVLVAIAASLMLNENLYLGSVFGALLIVCGLYMMLWGKSKEMRKMTQLVPSEITQESEAIEVVVLSTMDKTDHSNHNNTISNSPKVHRDYDSSKIEHEAS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2752 390 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016020|GO:0022857
Glsi11g2752 390 MobiDBLite consensus disorder prediction 361 390 - -
Glsi11g2752 390 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Glsi11g2752 390 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Glsi11g2752 390 MobiDBLite consensus disorder prediction 361 376 - -
Glsi11g2752 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 330 - -
Glsi11g2752 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2752 Glsi-ChrGlsi11 20691793 20695427 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2752 11 379 Nodulin-like Gene Family AT1G25270 41.240 1.47e-97 293