Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2746 ATGAATATATGGAAAACTTTGCATGGGTTGAAGCCAGCTTTATTAATGGTCCTTGTACAGATTGCATTTGCTTCTGTTAATGTGTTCTCTACAAGGAACAAGAGACCAAAGATGACATGGAGGGTGCTTGTTATGGCATTTCTTTGTGGCCTATTTGGGGAAAGTTCATCTCAAAACCTGTACTTTGAAGCCCTGACTCAACGTATGCTTCCACTGTCTATAACCTCATTCCAGCAGTCACTTTTATCTTGGCCATCATTTTTGGGTAGGAACGAGGATGGTGCCGCGATAGACAGGGATGAGGATAGAGAGTTAAGAGAGTGGAAAAAACAAGGATTACTAGGAAAGATCGTTTTGTCCCCACCATTCCAACGCAAGACATGGTTTACTAAGTATGTCTATGTTCCTATTTATGCCTTTATAGGGAGAAGGGCTGAAAGGAGACTTATAAAGAGTAGGCTAGGAGAGGCGGCACAAATTGCATTTGCTTTTGTTAATGTTCTCTACAAGGTTGCCTTTAACCGTGGAATGAGTGTCAGGGTTCTCACTGCCTATCGCCTCATTTTTGCCTCTGCTTTCACTCTTCCTCTTGCCCTGTTTTTTGAAAGGAACAAGAGACCAAAGATGACATGGAGGGTGCTTTTTATGGCATTTCTTTGTGGCCTATTTGGGGGAAGTTTGTCTCAAAACCTTTACTTTGAAGCCCTGGCTTTGGTATCGGCCACGTTTGCTTCCACTATTTTTAACCTCATTCCGGCAGCCACTTTTATCTTGGCCATCACTTTTGGTTTTGAAAGATTAAATTTCCAAAAGGCAGCAGGGAAGGTCAAGGTTTTTGGAACAATAATAGGAATTGGAGGGGCAATGCTTCTAACCTTTGTGAAAGGTGTAGAAATTGACATATGGTCCTTCCACATTAACCTTTTGCATCAAAACGGCAACGCTGAAGCATCACACGGTAGCAAATTTCTGGGTATTCTCTGTGGTATTGCAAGCTGCGTCTGTTTTGCACTATGGTTCATCATTCAGGCTAAGATGAGTGAAGAATACCCAACCCATCATTCAAGCACTGCTTTGATATCTATCATGGGAGCAATACAAGCCACAGTGTTTGCTCTTTGTGTTGAGAAGGATTGGAGCCAATGGAAATTGGGCTGGAATGTTAGGCTTCTAACTGCTGCTTATTCGGGAATTGTGGCCTCTGGGATAATGATTATTGTGATTGCGTGGTGTGTAAGGATGAAAGGCCCACTGTTTGCCTCTGTTTTCAACCCTCTCATGCTTGTGCTTGTAGCCATTGCTGGTTCTTTGATGTTGGATGAGAACCTATACTTAGGAAGTATGATTGGAGCAGTGCTGATTGTGTGTGGCTTGTACTTGGTGTTATGGGGAAAGAGCAAAGAAATGAAAAGGATAACTCAGTTAGTGTCATCAGAAATCCGCCAAGAATCTGAAGCAATTGGGATTGTTGTTGATCATGATAAAAGGGATCCACCCCAGCAGCCACAGCCAAACCAAACCAGTGGTAGCAGCAATGTTCGAGATGGTTCATCAAGAAGTGATGAGCTAGAAGAACTTGACACTCACAATAAGAGGAAAGAAAACGTACCACGTCCTTAG 1620 0.4278 MNIWKTLHGLKPALLMVLVQIAFASVNVFSTRNKRPKMTWRVLVMAFLCGLFGESSSQNLYFEALTQRMLPLSITSFQQSLLSWPSFLGRNEDGAAIDRDEDRELREWKKQGLLGKIVLSPPFQRKTWFTKYVYVPIYAFIGRRAERRLIKSRLGEAAQIAFAFVNVLYKVAFNRGMSVRVLTAYRLIFASAFTLPLALFFERNKRPKMTWRVLFMAFLCGLFGGSLSQNLYFEALALVSATFASTIFNLIPAATFILAITFGFERLNFQKAAGKVKVFGTIIGIGGAMLLTFVKGVEIDIWSFHINLLHQNGNAEASHGSKFLGILCGIASCVCFALWFIIQAKMSEEYPTHHSSTALISIMGAIQATVFALCVEKDWSQWKLGWNVRLLTAAYSGIVASGIMIIVIAWCVRMKGPLFASVFNPLMLVLVAIAGSLMLDENLYLGSMIGAVLIVCGLYLVLWGKSKEMKRITQLVSSEIRQESEAIGIVVDHDKRDPPQQPQPNQTSGSSNVRDGSSRSDELEELDTHNKRKENVPRP 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2746 539 MobiDBLite consensus disorder prediction 517 539 - -
Glsi11g2746 539 Pfam EamA-like transporter family 324 462 IPR000620 GO:0016020
Glsi11g2746 539 Pfam EamA-like transporter family 158 291 IPR000620 GO:0016020
Glsi11g2746 539 MobiDBLite consensus disorder prediction 500 516 - -
Glsi11g2746 539 SUPERFAMILY Multidrug resistance efflux transporter EmrE 382 467 - -
Glsi11g2746 539 PANTHER WAT1-RELATED PROTEIN 158 477 IPR030184 GO:0016020|GO:0022857
Glsi11g2746 539 SUPERFAMILY Multidrug resistance efflux transporter EmrE 185 291 - -
Glsi11g2746 539 MobiDBLite consensus disorder prediction 491 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2746 Glsi-ChrGlsi11 20575480 20588218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2746 157 470 Nodulin-like Gene Family AT1G25270 43.671 2.93e-91 282