Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2744 ATGAATATATGGAAAACATTGCATGGGTTGAAGCCAGCTTTATTAATGGTGCTTGTGCAGATTGCATTTGCTTCTGTTAATGTTCTCTACAAGGTTGCCTTTAACCGTGGAATGAGTGTCAGGGTTCTCACTGCCTATCGCCTCATTTTTGCCTCTGCTTTTACTCTTCCTCTTGCCCTTCTAATTGAAAGGAACAAGAGACCAAAGATGACTTGGAGGGTGCTTTTTATGGCATTTCTTTGTGGCCTATTTGGGGGAAGTTTGTTTCAAAACCTTTACTTTGAGGCCTTGGCTTTGATATCGGCAACGTTTGCTTCCGCTGTCTATAACCTCATTCCGGCCGTCACTTTTATCTTGGCCATCTCCTTTGGTCTTGAAAGATTAAATTTCCAAAAGGCAGCAGGGAAGGCCAAGGTTTTTGGAACAATAATAGGAATTGGAGGGGCAATGCTTCTAACCTTTGTGAAAGGTGTAGAAATTGACATATGGTCCTTCCACATTAACCTTTTGCATCAAAACGGCAACGCTGAAGCATCACATGGTAGCAAATTTCTGGGTATTCTCTGTGGTATTGCAAGCTGCTTCTGTTTTGCACTATGGCTCATCATTCAGGCTAAGATGAGCGAGGAATATCCAACCCCTTATTCAAGCACTGTTTTGATGTCTATAATGGGAGCAATACAAGCAACAGTGTTTGCACTTTGTGTTGAGAAGGATTGGAGCCAATGGAGATTGGGTTGGAATGTTAGGCTTCTAACTGCTGCTTATTCGGGAATTGTGGCCTCTGGGATAATGGTTATTGTGATTGCGTGGTGTGTAAGGATGAAAGGCCCCCTGTTTGCCTCTGTTTTCAACCCTCTCATGCTGGTCCTTGTAGCCATTGCTGGTTCTTTGATGTTGGATGAGAACCTATACATAGGAAGCGTGATTGGAGCCGTGCTGATTGTGTGTGGCTTGTACTTGGTGTTATGGGGAAAGAGCAAAGAAAAGAAAAGGATAACTCAGTTAGTACCATCAGAAATCACCCAAGAATCTGAAGCAATTGAGGTTGTTGTGGATCATGATAAAAGGGATCCACCCCAGCAGCCACAGCCACAGCCAAACCAAACCAGTGGTAGCAGCAATGTTCAAGATGGTTCCTCAAGAAGTGATGAGCAAGATGAACTTGACACTCACACTAAGAGGAGAGAAGATGTACCATAG 1203 0.4356 MNIWKTLHGLKPALLMVLVQIAFASVNVLYKVAFNRGMSVRVLTAYRLIFASAFTLPLALLIERNKRPKMTWRVLFMAFLCGLFGGSLFQNLYFEALALISATFASAVYNLIPAVTFILAISFGLERLNFQKAAGKAKVFGTIIGIGGAMLLTFVKGVEIDIWSFHINLLHQNGNAEASHGSKFLGILCGIASCFCFALWLIIQAKMSEEYPTPYSSTVLMSIMGAIQATVFALCVEKDWSQWRLGWNVRLLTAAYSGIVASGIMVIVIAWCVRMKGPLFASVFNPLMLVLVAIAGSLMLDENLYIGSVIGAVLIVCGLYLVLWGKSKEKKRITQLVPSEITQESEAIEVVVDHDKRDPPQQPQPQPNQTSGSSNVQDGSSRSDEQDELDTHTKRREDVP 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2744 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 329 - -
Glsi11g2744 400 MobiDBLite consensus disorder prediction 348 400 - -
Glsi11g2744 400 MobiDBLite consensus disorder prediction 381 400 - -
Glsi11g2744 400 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Glsi11g2744 400 Pfam EamA-like transporter family 11 153 IPR000620 GO:0016020
Glsi11g2744 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 152 - -
Glsi11g2744 400 PANTHER WAT1-RELATED PROTEIN 11 339 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2744 Glsi-ChrGlsi11 20536892 20541110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2744 10 331 Nodulin-like Gene Family AT1G25270 44.753 5.48e-98 294