Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2743 ATGGCAATACCAGTTCACAGATTTTTCAGTCGAAACTATCGGTTTGGTCCGGATTTGCATAACTTCCATCCTAATATTTCTTATGGTATTGATGTTTTTGTTAACTGATTATGTAGTAGTGTTGCTAAAGTGATAGTGGTAGTAGCAGCGACGATGACAGATATATGGAATGTGGTGCATGGGACGAAGCCAGCCATGCTAATGGTGGTGGTGCAGGTAGCATTTGCTGGGGTCAATGTGCTGTACAAACTCGCCGTGAACGATGGCATGAACCTGAGAGTGGTTGTTGCCTACCGCTTTGTTTTCGCCACTGCTTTCATAGCTCCGCTTGCTCTCATTCTTGAAAGGAAAAAGAGGCCAAAAATGACATGGACAATACTATCTCAGGCATTTTTCTGTGGGTTATTTGGAGGAGTATTGGCACAAAACCTTTACTTGGAGGCGTTGGCTTTAACATCAGCAACGTTTGCTTCGGCTATGTCCAATCTTATTCCAGCTATCACCTTTATCATGGCTGTCTCCTTCGGTTTGGAAAAAATAAATTTGAGAAGAGCAGCAGGGAAGGCCAAGATCATTGGAACCCTAATCGGAATTGGTGGAGCCATGCTATTAACTTTCTTCAAAGGTGCAGAAATAGACATGGGGTCCTTCCACGTAACCCTATTGCATCATCATCATAACGGCCACGTGGCATCACCACAGTTCACCTCTGGTGGTAGCACCCTCTTGGGTGCTCTCTGCGCCCTGGCCAGCTGCTTCTGCTATGCTCTCTGGCTCATCGTTCAGTCTAAGATGAGTGAGAGATACCCTAGTCATTACTCAAGCACAGCTTTGATGTCTTTAATGGCAGCACTGATATCTACTGCGTTTGCTCTTTGCCTTGAGAGGGATTGGAGTCAATGGAGATTGGGTTTGAATGTTAGGCTTCTAACTGTGGCTTATTCGGGAATAGTGGTTTCTGGAGCCATGGTGGTAGTGATTGCATGGTGTGTGCACATGAGAGGCCCCCTTTTTGTCTCCATTTTCAACCCTCTGATGCTTGTGGTTGTGGCCCTTGCTGGATCTTTCATGTTGGACGAGAAGCTACATCTTGGAAGTATAATTGGAGCTGTGTTAATTGTGTGTGGCTTATACGTGGTTCTATGGGGGAAAGGCAAAGAAATGAAGAAGATGAATCAACTAGTGCCATCACAGAGCCTCCATGAATCGGCCGGCACGGTAGAAATCATCGTTGAAACTCCGGTGGACAACAAAATCAACCACCACAATAATGCTGCAAATGTTGTTAAGGATGATGAAGATGTGTCAGAAAATAGACGTGATGTAATAGTCTACGATAATAACAGGAAGAAAGAAGAAGAAGAAGAAGAAAAGAAGTAA 1380 0.4449 MAIPVHRFFSRNYRFGPDLHNFHPNISYGIDVFVNXLCSSVAKVIVVVAATMTDIWNVVHGTKPAMLMVVVQVAFAGVNVLYKLAVNDGMNLRVVVAYRFVFATAFIAPLALILERKKRPKMTWTILSQAFFCGLFGGVLAQNLYLEALALTSATFASAMSNLIPAITFIMAVSFGLEKINLRRAAGKAKIIGTLIGIGGAMLLTFFKGAEIDMGSFHVTLLHHHHNGHVASPQFTSGGSTLLGALCALASCFCYALWLIVQSKMSERYPSHYSSTALMSLMAALISTAFALCLERDWSQWRLGLNVRLLTVAYSGIVVSGAMVVVIAWCVHMRGPLFVSIFNPLMLVVVALAGSFMLDEKLHLGSIIGAVLIVCGLYVVLWGKGKEMKKMNQLVPSQSLHESAGTVEIIVETPVDNKINHHNNAANVVKDDEDVSENRRDVIVYDNNRKKEEEEEEKK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2743 459 SUPERFAMILY Multidrug resistance efflux transporter EmrE 98 207 - -
Glsi11g2743 459 PANTHER WAT1-RELATED PROTEIN 63 393 IPR030184 GO:0016020|GO:0022857
Glsi11g2743 459 Pfam EamA-like transporter family 243 381 IPR000620 GO:0016020
Glsi11g2743 459 Pfam EamA-like transporter family 64 205 IPR000620 GO:0016020
Glsi11g2743 459 SUPERFAMILY Multidrug resistance efflux transporter EmrE 281 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2743 Glsi-ChrGlsi11 20521678 20530954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2743 63 431 Nodulin-like Gene Family AT1G25270 44.444 1.56e-101 306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2743 11 20521678 20530954 Glsi11g2743 11 20521678 20530954 CCT
Glsi11g2743 11 20521678 20530954 Glsi11g2743 11 20521678 20530954 ECH