Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2742 ATGAATTGGTCAGCACAGTCGACATTGTCGTCAAATCTCTGGTGGAAGACAGAAGCAACCATCACAAAAATGTTTCAAACGTTGTTAGGGATGGTGAAGATTAATCAGAAAAGGGACGTGAGCTTTTTGATCCGTCCTCCATGGACAATTGTTCTTCGTCTCAACTCCAATCAGGTTAATTCAGAGCAGATTCATTCCTCAAAGCTTTTCCAATCTGATATGGTGGATGATTTCAGAATGGAAATAGTAGGATTGGACATACAGCTCTCACTTGCTTCCATAGGTTTGAGGCACCAGTGTGGCCAATCTGGTAATTTATTGCCAAATCACCATGAGCTGGTGGCGCTGTGGTTAGTGGTGGTAGTAGTTGCGGTGGCGACGATGACCAATATATGGAAAGCGGTGGATGGGTTGAAGCCAGTGATGCTAATGGTGATGGTGCAGGTAGCATATAGTGGAGTCAATGTTCTATACAAACTCGCAGTGAACGATGGCATGAATTTGAGAATTGTTATTGCCTATCGCTTTGTTTTTGCCACTGCTTTCGTAGCTCCATTTGCTCTCATTTTTGAAAGGAAAAAGAGGCCAAAGATGACTTGGAAAATACTTTTTCTGGCAATTCTATGTGGGTTATTTGGAGGAGCACTGGCACAAACGTTTTACTTGGAGACGCTGGCTTTAACATCGGCAACGTTCGCTTCCGCCATGAACAATCTAAATCCAGCCGTCACCTTTGTTTTGGCCCTCTGCTTCGGTATGGAAAGATTCAATTTGGGAACAGCGGCAGGAAAGGCCAAGATCATCGGAACACTGACCGGAATTGGTGGGGCCATGGTGCTAACTTTCCTTAAAGGTGCACAATTAGATATAGGTTCCTTCCACGTCAACCTTTTGCATCATCACCATAACGCCCACGTGGCATCACTACACTCTAGCTCTGGTGGTAGCCCCATATTGGGTGCCCTCTCCGCCCTAGGTGGCAGCTTCTCTTTTGCACTGTGGCTCATCATTCAGACTAAGATGAGTAAGAGATACCCAAATCTCTCAAGCACAACGTTAATGTGTCTAACAGCATCAGTGTTATGTATTGCGTTTGCTCTTTGCCTCGAGAGGGATTGGAGTGAATGGAGGTTGGGTTGGAATGTTAGGCTTCTAACAGTGGCTTATTCGGGAATAATGCCTGCTGGAGTAGTGGTGATAGTGATTTCATGGTGTGTGCATAAGAGAGGCCCTCTTTTTGTCTCTGTGTTTGCCCCTCTACAGCTAGTAATGGTGGCTATTGCTGGATATTTCATGTTGGATGAGAAGCTACACCTCGGAAGTATAATTGGAGCTGTGCTGATTGTTTGTGGGTTATACGCGGTTCTGTGGGGTAAAGCCAAAGAGATGAAAAAGATGAATCTATTAGTGCCATCATCGAGCCTCCCAGTATCTGACACAGTCCAAATTGTCGTGAAATCTCCGGTGAATGACAAAGATAACGACAACAACAATAATGCTGTCATGGATAGGAATTATGAAGATTCATCAGAAAATGGAGGTGAAGTAGTGCATGATAGTCACAATAGAAAGAAAGAACTAGTAGTAATATCATGA 1596 0.4417 MNWSAQSTLSSNLWWKTEATITKMFQTLLGMVKINQKRDVSFLIRPPWTIVLRLNSNQVNSEQIHSSKLFQSDMVDDFRMEIVGLDIQLSLASIGLRHQCGQSGNLLPNHHELVALWLVVVVVAVATMTNIWKAVDGLKPVMLMVMVQVAYSGVNVLYKLAVNDGMNLRIVIAYRFVFATAFVAPFALIFERKKRPKMTWKILFLAILCGLFGGALAQTFYLETLALTSATFASAMNNLNPAVTFVLALCFGMERFNLGTAAGKAKIIGTLTGIGGAMVLTFLKGAQLDIGSFHVNLLHHHHNAHVASLHSSSGGSPILGALSALGGSFSFALWLIIQTKMSKRYPNLSSTTLMCLTASVLCIAFALCLERDWSEWRLGWNVRLLTVAYSGIMPAGVVVIVISWCVHKRGPLFVSVFAPLQLVMVAIAGYFMLDEKLHLGSIIGAVLIVCGLYAVLWGKAKEMKKMNLLVPSSSLPVSDTVQIVVKSPVNDKDNDNNNNAVMDRNYEDSSENGGEVVHDSHNRKKELVVIS 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2742 531 SUPERFAMILY Multidrug resistance efflux transporter EmrE 355 461 - -
Glsi11g2742 531 SUPERFAMILY Multidrug resistance efflux transporter EmrE 174 269 - -
Glsi11g2742 531 MobiDBLite consensus disorder prediction 488 519 - -
Glsi11g2742 531 Pfam EamA-like transporter family 319 456 IPR000620 GO:0016020
Glsi11g2742 531 Pfam EamA-like transporter family 139 278 IPR000620 GO:0016020
Glsi11g2742 531 MobiDBLite consensus disorder prediction 488 506 - -
Glsi11g2742 531 PANTHER WAT1-RELATED PROTEIN 139 468 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2742 Glsi-ChrGlsi11 20503478 20515127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2742 138 505 Nodulin-like Gene Family AT1G25270 43.902 3.09e-103 312