Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2730 ATGCCCGCAGCAGTGATGGCGTTTGTTTTGGCTCTCACATTCACAATTTTCTTAATCGGAATTTCCAAAGGGCAGCTTCAAGTGGGTTTCTACTCCAAAACATGCCCAGAAGCTGAATCCACCGTGCGATCCATTGTTGGAGATGCAGTTCTCTCTGACCCAAACATGGCTGCCATCTTACTCAGGCTTCACTTTCATGACTGCTTCGTTGAGGGATGTGATGGTTCAATTCTAATAGACAATGGGGCACAAGGGGAGAAGCAAGCATTTGGGCATCAAGGGGTTAGAGGATTTGAGGTGATAGAAAAAGCCAAGGCACAATTGGAAGCTTCTTGCCCAGGAGTGGTTTCCTGTGCAGACATTGTGGCATTAGCAGCCAGAGACTCTATAGCCATGGCAAATGGACCATCATACCAAGTTCCAACAGGGAGGAGGGATGGGTTGGTTTCCAATATTTCACTTGCAGATGACATGCCAGATGTTAGTGACTCTATTATGCAACTCAAGGTCAAGTTTCTAAATAAGGGCCTCACGGACAAAGACCTTGTGCTTCTTAGTGCTGCTCATACAATAGGAACCACAGCCTGCTTCTTCATGAGCAGAAGACTGTACAACTTTGTGCCCGGTGGTGGATCAGACCCATCTATCAGCCCAAATTTCCTCCCGGAGCTGAAGGCGAGGTGCCCGGAGAACGGCAACGTCAACGTCCGGCTAGCCATGGATGAAGGGAGTGAGGACAGATTTGACATACACATATTGCAGAACATTAAGGAAGGTTTTGCTGTGCTTGAATCAGATGCGAGGCTTAATGACGATCCTGTCACTAAGAGTATCGTTGAGTCCTACTTTGGTGCTCTTAATCCACTGTTTGGACCATCTTTTGAAGCTGATTTTGTTGATTCTATTGTAAAAATGGGCCAAATTGGAGTTAAGACTGGCTTTTTTGGAGAGATTAGGCGCGCCTGCTCGGCATTTAATTAA 981 0.4648 MPAAVMAFVLALTFTIFLIGISKGQLQVGFYSKTCPEAESTVRSIVGDAVLSDPNMAAILLRLHFHDCFVEGCDGSILIDNGAQGEKQAFGHQGVRGFEVIEKAKAQLEASCPGVVSCADIVALAARDSIAMANGPSYQVPTGRRDGLVSNISLADDMPDVSDSIMQLKVKFLNKGLTDKDLVLLSAAHTIGTTACFFMSRRLYNFVPGGGSDPSISPNFLPELKARCPENGNVNVRLAMDEGSEDRFDIHILQNIKEGFAVLESDARLNDDPVTKSIVESYFGALNPLFGPSFEADFVDSIVKMGQIGVKTGFFGEIRRACSAFN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2730 326 Gene3D - 29 326 - -
Glsi11g2730 326 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 ProSiteProfiles Plant heme peroxidase family profile. 25 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 FunFam Peroxidase 29 178 - -
Glsi11g2730 326 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Glsi11g2730 326 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601|GO:0042744
Glsi11g2730 326 Pfam Peroxidase 43 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 FunFam Peroxidase 159 305 - -
Glsi11g2730 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Glsi11g2730 326 PANTHER PEROXIDASE 25-RELATED 12 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g2730 326 Gene3D Peroxidase, domain 2 159 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2730 Glsi-ChrGlsi11 20406423 20409115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2730 5 326 Peroxidase AT1G77100 56.173 8.23e-118 341