Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2729 ATGCCATACGAGCTCTTTCTGTCACGTATACCTGACGCTCTCCGGCCTCTGCAGCTGCTAGATTGGTATGATTATCTCTATTTCTCTTGCATCACTTCTACGAGTGCCGGCCTGGATACGAGAAGTAAGGATATTGAAGATATATTGATTCTTTTTGGGGATCACCTATATAGGATGGACTATATGGACTTTGTTAAAGCAGCTACTAGCCACCAGAGAGCAACTTGGGTGAGGGTATTGTATTGCCTGAGAGACGAGGGATTACATGTGAGTGGTGGATTTTCTTCTAGGGTCTCAAAAAGTGCATTGAGAGAAAGGTTTAAGGCCTTCAATGCTATGTTTAAGGAGGTTCATAGAACTCAAGCAACCTGGTTGATACACAGTTTCCCAGCATTTGAGGAGGATAACTCATTGATGGAGTAG 423 0.435 MPYELFLSRIPDALRPLQLLDWYDYLYFSCITSTSAGLDTRSKDIEDILILFGDHLYRMDYMDFVKAATSHQRATWVRVLYCLRDEGLHVSGGFSSRVSKSALRERFKAFNAMFKEVHRTQATWLIHSFPAFEEDNSLME 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2729 140 Pfam Nucleotidyl transferase 41 75 IPR005835 GO:0009058
Glsi11g2729 140 SUPERFAMILY Cullin repeat-like 30 126 IPR016159 -
Glsi11g2729 140 PANTHER EXOCYST COMPLEX PROTEIN EXO70 51 127 IPR004140 GO:0000145|GO:0006887
Glsi11g2729 140 Pfam Exo70 exocyst complex subunit 41 126 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi11g2729 140 Gene3D Exocyst complex component Exo70 40 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2729 Glsi-ChrGlsi11 20398188 20399566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2729 51 126 EXO70 exocyst subunit family AT1G72470 63.158 1.21e-27 105