Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2726 ATGGGAGATAATAATGTCAACCTTCCACCTGGGTTTAGGTTTTATCCCACAGACGAAGAGCTTGTAGTCCATTTCCTTCACAGAAAGGCAGCACTTTTACCTTGCCACCCGGATGTCATCCCTGACCTTGAGCTCTATCCCTATGACCCATGGGAACTTGATGGTAAAGCTCTGGGAGAGGGAAACCAATGGTACTATTATAGCAGGAGGACACAAAATAGGGTGACTGGAAATGGGTATTGGAAGCCAATGGGAATGGAAGAACCAGTGGTAGCAGCAGCAAGCTCAAGCAATAACAAGAGAGTTGGAATGAAGAAATATTTTGCGTTCCATGTGGGAGAAGCCTCATCTGGTATCAAAACCAATTGGATAATGCAAGAGTATCGTCTACCAGATTCAGCGTCTTCCTCTAGAAGATCATCCAAAAGAAAATCACTACCAAAACCAGATTATAGTAAATGGGTCATTTGTCGAGTCTATCAACACGATGGAGACAATGATGATGACGATAGAACAGAGCTCTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGACGAAATAAGCTTACCAAATTAG 585 0.4256 MGDNNVNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLELYPYDPWELDGKALGEGNQWYYYSRRTQNRVTGNGYWKPMGMEEPVVAAASSSNNKRVGMKKYFAFHVGEASSGIKTNWIMQEYRLPDSASSSRRSSKRKSLPKPDYSKWVICRVYQHDGDNDDDDRTELSCLDEVFLSLDDLDEISLPN 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2726 194 Gene3D NAC domain 17 166 IPR036093 GO:0003677|GO:0006355
Glsi11g2726 194 PANTHER NAC TRANSCRIPTION FACTOR 56 8 166 - -
Glsi11g2726 194 FunFam NAC domain-containing protein 104 17 165 - -
Glsi11g2726 194 ProSiteProfiles NAC domain profile. 8 162 IPR003441 GO:0003677|GO:0006355
Glsi11g2726 194 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Glsi11g2726 194 Pfam No apical meristem (NAM) protein 9 130 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2726 Glsi-ChrGlsi11 20309235 20310307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2726 6 167 NAC Transcription Factor Family AT1G01720 44.706 1.43e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi11g2726 NAM 1.1e-30 No_clan