Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2723 ATGAAGCCTATGACTCTCCCAATACTTCCATTTTGGCTCATATTGCTTCTTCACTCTACTTTAGACTCACTATGGTTTCAACCTTGCAGTGCTACTTCTGCATTAGGAAACCAGACCGATTATTTGGCCTTGCTCAAATTCAAGGAATCAATATCTCATGACCCATACAAAATTTTAACCTCGTGGAATGGTTCTATTCACTTCTGCAACTGGCATGGAATCACTTGCAGCCGTAGGCACCAAAGAGTTACGGAGTTGAACTTGGGCGGATATCTCTTGCGTGGATTTTTATCACCTCACATTGGCAATCTCTCCTTTCTGAGAAGCATCACGCTCCAGAACAATAGCTTCCACGGAGAAATCCCACAAGAGTTGGGTCGTTTATTTCGAATGAAGATACTCTCTCTCGTCAATAATACATTGGCTGGCAAAATTCCTACTAACATCACAAGTTGCTCTGAACTCAGGTACTTACATTTTTCTAGAAATAATCTTACTGGTAAAATACCAACAGAGATTGGTTTTCTCAAGAAGCTTGAAGGATTACATCTTCAAATAAATGGTTTATCAGGACAAATCCCAGCCTCTGTGTGGAATCTTTCTTCCCTTGGAATTCTTTCTCTGAATTTTAATAACTTGGAGGGGAATATACCAGAAGAAATAGGCCTTATGAAAAATTTGACATCATTGGAAATAGTTGCCAATAAACTTTCCGGTATGCTTCCTCATTCTCTTTTCAATTTGTCCTCTCTCACTGTAATTTCAGCAACATATAATCAATTTAATGGCTCACTTCCAGCTAACGTGTTCCTCACCCTCCCTAATATCCAAGTGTTGGAAATTTCAGAAAATCAAATCTTAGGTCCTATCCCATCTTCCGTCACAAATGCATCTGCGCTTCAAGAACTTGAAATAGCTTATAACCATTTTTTAGGATCAGTTCCAAGTCTTGAAAAGCTGCATGACCTTTCCTTTCTACAGTTAGCTTTCAATAACCTGGGTAGTAATTCATCTAAAGACTTGGAATTCTTATCATCTCTGGTAAATTGTAGTAACTTGTATATTCTAGATACAGCTGGTAATAATTTTGGAGGTCAGTTACCTAATACTATAGGAAATTTGTCCACCCAACTCAATGAGCTATACTTTGGTAGTAATAAGATATTTGGGAAAATTCCTCCAGCATTAGGAAATCTGATTAACTTGAATATCTTAGATATGGACAATAATTATTTCACTCAGGTCATCCCAGCTACCTTTGGAAAGTTTCAAAAGATGCAAAGATTTTCTCTAAGGGAAAACAAATTGTCAGGAGAAATACCATCTTCTATAGGCAACCTCAGTCAATTATTGCTATTGGATTTGTCACATAATATGTTAGAAGGACATATTCCTCCAAGTATTGGGAATTGCCGAAGTTTACAGTACCTGGACTTGTCACAAAACAATCTTACTGGAGATATACCAGTAGAGGTAATTGGTCTTTCGTCTTTGTCAATCTTACTGAACTTGTCACATAACTCATTCAATGGCAATCTCCATGACGAAGTGGGCAAGTTAAAAAATATTGATGATTTAGACGTCTCTCAAAATCATCTCTCTGGGCGGATTCCTCAAGCCATTGGAGACTGCATGAGCTTGGAGTACCTCTATTTACAAGGAAATTCCTTCCAAGGAACCATTCCTTCATCTTTGGCTTCATTAAAAGGTCTTCGGTATTTAGATCTGTCACGAAGCAACTTGTCTGGATCAATTCCAAAAGGCCTGCAGGATCTTTTTGGTTTGCAATACTTGAATGTTTCTTTTAACTTATTGGACGGTGAGGTACCAAGGAAAGGTGTTTTCGGCAATGCAAGTGCAATATCAGTAGCTGGCAATATTAAGCTTTGTGGAGGTATCTCAGAGCTGAAGCTACCACTATGCCCTTCGAAAGTTATGAAAAAAAGAAAACACCACAGTTTTAAGTTGGTGACAGTGATAAGTTGTGTGGTTGCTTTTTTTCTTCTATTGTCATCGATTGTTGCCATTTATCATATGAGAAAAAGAAACAGGAAATCATCTTCAAATTCACCAACAATTGACCTTCTTTCCAAAGTGTCATACCAAAGTTTACACAATGCCACTGACGGGTTCTCAGCCAACAACTTGATAGGATCTGGAAGTTTTGGCTCTGTGTATAAGGGAAGTATCGACTCTCAAGAAGTTGTTGCAATAAAGGTACTCAATCTTCACATCAAGGGAGCTCACAAGAGTTTCGTGGCTGAATGTAATGCACTTAGAAATATAAGGCAACGAAATCTAGTAAAGGTTTTAACATGTTGCTCCAGCACAGATTACAAGGGACAGGAATTTAAAGCTCTAGTTTTTGAGTACATGGCAAATGGAAGCTTAGAAAACTGGTTGCATCCAATTACGAAAAATGCAAATCATCCAAGAACTTTTCTCCTTGATCAGATATTAAATATTGTTACGGATGTTGCTTCTGCATTACATTATCTTCACTACGAATGCGAGCAACCCATTGTTCATTGTGATTTAAAGCCGAGCAATGTCCTTCTTGATGGCGACATGGTTGCTCATGTGAGTGATTTTGGACTAGCAAGACTGCTTCCTACAATTAATGGCATCTCTAATAAGCAAAGCAGCACATCTGGAATAAAGGGTACTATTGGCTATGTTCCTCCAGAATATGGAATGGGTTTTGCGGTGTCAATAGAGGGTGACATGTACAGTTTTGGGATTCTTGTTTTGGAAATGTTAACTGGAAGAAGACCAACAGAAGATAAGTTCAAAGACGGTCAAAATCTCCACAACTACGTGGAAAGTGCATTTCCTAATAATCTTTTGCAGATTGTGAACCCAGCTATTCTCCCTAGCGAAACAGAACAGATAGTGGAAGCATCAAGAGAACAATGGGAGAACACGACACTGATACATCCTAATATAGAGAAATGCTTATTTTCTCTATTTAGGATTGGACTTTCTTGTTCGGTGGAAACACCAAAAGAAAGAATGAGTATGGTGGAAGTCACTAGGGAATTAAATTTAATAAGAAATTCCTTTCTTTCTAGTGGGTTCAGTAGAGTCTAA 3090 0.3816 MKPMTLPILPFWLILLLHSTLDSLWFQPCSATSALGNQTDYLALLKFKESISHDPYKILTSWNGSIHFCNWHGITCSRRHQRVTELNLGGYLLRGFLSPHIGNLSFLRSITLQNNSFHGEIPQELGRLFRMKILSLVNNTLAGKIPTNITSCSELRYLHFSRNNLTGKIPTEIGFLKKLEGLHLQINGLSGQIPASVWNLSSLGILSLNFNNLEGNIPEEIGLMKNLTSLEIVANKLSGMLPHSLFNLSSLTVISATYNQFNGSLPANVFLTLPNIQVLEISENQILGPIPSSVTNASALQELEIAYNHFLGSVPSLEKLHDLSFLQLAFNNLGSNSSKDLEFLSSLVNCSNLYILDTAGNNFGGQLPNTIGNLSTQLNELYFGSNKIFGKIPPALGNLINLNILDMDNNYFTQVIPATFGKFQKMQRFSLRENKLSGEIPSSIGNLSQLLLLDLSHNMLEGHIPPSIGNCRSLQYLDLSQNNLTGDIPVEVIGLSSLSILLNLSHNSFNGNLHDEVGKLKNIDDLDVSQNHLSGRIPQAIGDCMSLEYLYLQGNSFQGTIPSSLASLKGLRYLDLSRSNLSGSIPKGLQDLFGLQYLNVSFNLLDGEVPRKGVFGNASAISVAGNIKLCGGISELKLPLCPSKVMKKRKHHSFKLVTVISCVVAFFLLLSSIVAIYHMRKRNRKSSSNSPTIDLLSKVSYQSLHNATDGFSANNLIGSGSFGSVYKGSIDSQEVVAIKVLNLHIKGAHKSFVAECNALRNIRQRNLVKVLTCCSSTDYKGQEFKALVFEYMANGSLENWLHPITKNANHPRTFLLDQILNIVTDVASALHYLHYECEQPIVHCDLKPSNVLLDGDMVAHVSDFGLARLLPTINGISNKQSSTSGIKGTIGYVPPEYGMGFAVSIEGDMYSFGILVLEMLTGRRPTEDKFKDGQNLHNYVESAFPNNLLQIVNPAILPSETEQIVEASREQWENTTLIHPNIEKCLFSLFRIGLSCSVETPKERMSMVEVTRELNLIRNSFLSSGFSRV 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2723 1029 SMART LRR_typ_2 520 544 IPR003591 -
Glsi11g2723 1029 SMART LRR_typ_2 200 224 IPR003591 -
Glsi11g2723 1029 SMART LRR_typ_2 447 471 IPR003591 -
Glsi11g2723 1029 SMART LRR_typ_2 104 128 IPR003591 -
Glsi11g2723 1029 SMART LRR_typ_2 248 272 IPR003591 -
Glsi11g2723 1029 SMART LRR_typ_2 399 422 IPR003591 -
Glsi11g2723 1029 SMART LRR_typ_2 592 617 IPR003591 -
Glsi11g2723 1029 SMART LRR_typ_2 568 591 IPR003591 -
Glsi11g2723 1029 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 37 198 - -
Glsi11g2723 1029 SMART serkin_6 711 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2723 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Glsi11g2723 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 339 647 - -
Glsi11g2723 1029 Gene3D Ribonuclease Inhibitor 40 150 IPR032675 -
Glsi11g2723 1029 SUPERFAMILY Protein kinase-like (PK-like) 684 1014 IPR011009 -
Glsi11g2723 1029 SUPERFAMILY L domain-like 38 333 - -
Glsi11g2723 1029 Gene3D Phosphorylase Kinase; domain 1 693 791 - -
Glsi11g2723 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 681 791 - -
Glsi11g2723 1029 Gene3D Transferase(Phosphotransferase) domain 1 792 1024 - -
Glsi11g2723 1029 ProSitePatterns Protein kinases ATP-binding region signature. 717 739 IPR017441 GO:0005524
Glsi11g2723 1029 Pfam Protein kinase domain 713 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2723 1029 Gene3D Ribonuclease Inhibitor 246 641 IPR032675 -
Glsi11g2723 1029 SUPERFAMILY L domain-like 376 631 - -
Glsi11g2723 1029 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Glsi11g2723 1029 Gene3D Ribonuclease Inhibitor 151 234 IPR032675 -
Glsi11g2723 1029 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 792 1025 - -
Glsi11g2723 1029 PANTHER LEUCINE RICH REPEAT KINASE 2 344 1016 - -
Glsi11g2723 1029 Pfam Leucine rich repeat 546 605 IPR001611 GO:0005515
Glsi11g2723 1029 Pfam Leucine rich repeat 401 460 IPR001611 GO:0005515
Glsi11g2723 1029 ProSiteProfiles Protein kinase domain profile. 711 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2723 Glsi-ChrGlsi11 20285102 20288308 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2723 32 1024 Receptor kinase-like Gene Family AT3G47570 44.876 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi11g2723 Pkinase 1.3e-39 CL0016