Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2706 ATGAGTCAGCGTGTTGGTGACCAGCTTGGAGCGAAGGCAATGGAGGAAATAAGGAGTGGAGCTTCTTCGGGTCGCCACGGAGATCACACTTTGCCTTGTATTCACAAAGTGGGAGCTCCTCCTAAGCAAAATCTTGTGAAAGAGATTAAAGATGCAGTGAAGGAAACTTTCTTCTCCGACAACCCCTTAGGCCAGTTCAAAGACCAACCGGGATCAAGAAAGCTCGTTCTTGGGCTTCGAGCAGTTTTCCCAATTCTTGAATGGGGAAGAGACTACAATCTTGGCAAATTCAAAGGTGATCTTGTTTCTGGACTTACCATTGCAAGTCTCTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCTAATTTGGATCCCCAGTATGGACTCTACACCAGCTTTGTGGCTCCACTAGTATATGCTTTCATGGGCAGCTCTAGAGACATAGCGATAGGACCAGTTGCCGTGGTGTCCCTGTTGCTGGGGAGCATGCTGACGGACGAGATTAGTGACTACAAGAATCATGATTACCTGCGACTTGCTTTCACGGCCACCTTCTTTGCTGGAATCACTCAAATGACACTTGGTGTTTTCAGGCTTGGTTTCTTGATTGACTTCCTATCTCATGCTGCCATTGTGGGATTCATGGCCGGAGCTGCCATAACTATTGCTCTGCAACAGCTGAAGGGTCTACTGGGTATAAGCAATTTCACTAAGAAGACTGATATTGTTTCTGTCATGGATTCTGTTTTGAGTTCAGCACACCATGGGTGGAACTGGCAGACTATAGTGATAGGAGTATCATTCTTGGCCTTCCTTCTTACAACCAAGTCTATGGCTAAAAAGAACGAGAAATTCTTCTGGTTATCTGCAATTGCTCCCTTGACCTCTGTTGTATTGTCTACCATTTTCGTGTACGTTACTCGGGCCGATAAAAAAGGCGTTTCAATTGTGAAGCACATAGAAAGGGGAATAAACCCAACATCTGCTACTGAAATTTTCTTCGGTGGAAAATACCTTGGCCCAGGTATTCGGATTGGTGTGGTATCTGGTATAATCGCCCTCACGGAAGCTATAGCAATTGGGAGAACTTTTGCTGCCATGAAAGACTATTCACTGGATGGTAACAAAGAAATGGTGGCAATGGGAACCATGAATGTTATTGGCTCACTCACTTCTTGCTATGTAGCTACAGGGTCTTTTTCCCGGTCAGCGGTGAACTACATGGCAGGGTGTAGCAGTGCGGTATCAAACATAGTTATGTCCGTGGTTGTGCTATTAACTCTGGAACTCATTACGCCACTATTCAAGTTCACCCCAAATGCCGTGCTTGCTTCAATCATAATTGCTGCTGTGGTAGGCCTCGTGGACATAGAAGCAGCTGTTCTCCTTTGGAAGATCGACAAATTTGATTTTGTAGCCTGCATGGGAGCCTTCTTCGGTGTCATCTTCAAAAATGTTGAGATTGGCCTTCTCATTGCGGTGGTAATATCTTTTGCCAAAATTCTTTTGCAAGTAACGAGGCCAAGGACTGCAGTACTTGGGAGGATTCCAGGGACCAGTGTTTTCAGGAACATCCAGCAATACCCTAAAGCAACACTGGTTCCTGGCATGCTCATTATCAGAGTTGACTCTGCTATCTACTTCTCAAACTCCAATTATATCAAGGAGAGGATTCTGAGATGGCTGGCCGATGAAGATGCACGGAAGAAAGAAAGCGATTTACCCAGAATACAATACCTCGTAGTTGAAATGTCACCTGTGACTGACATTGACACCAGCGGCATCCATGCCTTCGAAGAGTTATATAAGAGCCTTCAGAAAAGAGAGGTCCAGCTGGTGTTGGCAAACCCTGGGCCAGTAGTAATGGAGAAGCTGCATGCATCCAAGTTCAGAGATTTAATTGGGGAAGACAAGATATTTCTTTCAGTGGCCGATGCTGTTTCTACCTTTGCCTCCAAGGCTGAAGAACTGGCTTGA 1980 0.454 MSQRVGDQLGAKAMEEIRSGASSGRHGDHTLPCIHKVGAPPKQNLVKEIKDAVKETFFSDNPLGQFKDQPGSRKLVLGLRAVFPILEWGRDYNLGKFKGDLVSGLTIASLCIPQDIAYAKLANLDPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGSMLTDEISDYKNHDYLRLAFTATFFAGITQMTLGVFRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGLLGISNFTKKTDIVSVMDSVLSSAHHGWNWQTIVIGVSFLAFLLTTKSMAKKNEKFFWLSAIAPLTSVVLSTIFVYVTRADKKGVSIVKHIERGINPTSATEIFFGGKYLGPGIRIGVVSGIIALTEAIAIGRTFAAMKDYSLDGNKEMVAMGTMNVIGSLTSCYVATGSFSRSAVNYMAGCSSAVSNIVMSVVVLLTLELITPLFKFTPNAVLASIIIAAVVGLVDIEAAVLLWKIDKFDFVACMGAFFGVIFKNVEIGLLIAVVISFAKILLQVTRPRTAVLGRIPGTSVFRNIQQYPKATLVPGMLIIRVDSAIYFSNSNYIKERILRWLADEDARKKESDLPRIQYLVVEMSPVTDIDTSGIHAFEELYKSLQKREVQLVLANPGPVVMEKLHASKFRDLIGEDKIFLSVADAVSTFASKAEELA 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2706 659 NCBIfam sulfate permease 84 647 IPR001902 GO:0016020|GO:0055085
Glsi11g2706 659 ProSitePatterns SLC26A transporters signature. 126 147 IPR018045 GO:0008271|GO:0008272
Glsi11g2706 659 ProSiteProfiles STAS domain profile. 528 651 IPR002645 -
Glsi11g2706 659 SUPERFAMILY SpoIIaa-like 530 651 IPR036513 -
Glsi11g2706 659 CDD STAS_SulP_like_sulfate_transporter 529 644 - -
Glsi11g2706 659 Pfam Sulfate permease family 97 476 IPR011547 GO:0016020
Glsi11g2706 659 Pfam STAS domain 529 647 IPR002645 -
Glsi11g2706 659 Gene3D STAS domain 508 655 IPR036513 -
Glsi11g2706 659 PANTHER SULFATE TRANSPORTER 47 651 IPR001902 GO:0016020|GO:0055085
Glsi11g2706 659 FunFam Sulfate transporter 31 508 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2706 Glsi-ChrGlsi11 20077084 20083103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2706 22 657 Inorganic Solute Cotransporters AT1G22150 71.429 0.0 915
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2706 11 20077084 20083103 Glsi11g2706 11 20077084 20083103 ECH