Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2705 ATGAATCTTTCATCCTTAACCTCATCGTTAACCTTAAGCAATCCAAAACCTTTATTTCATTCCCTTCCACTCTCAAATAAACGACAACTCATTACCCCCGTGAAGGTTGCAGCCGTTTCGTGCTCTGCCACTGCCATTAACAACAACGACAACAACTTCTACAAGATGCTCTCTCTCAGCACCGAAAGTGCAACCATGGAGGAGATCAAGATAGCTTACAGATCCATGGCCCTTCGGTACCACCCGGACGTGTGCCGTGACGCATCCATGAAGGAGGAGTCGAACAGGATGTTGGTGCAGCTCAATGCGGCTTACGAGACGCTTTCGAATCCCCATCTTCGTGCCGAGTATGACTGCAAATTATCAGGCTCGAGAAGTCGATTAAGTGTTGGATGTAGTGACGAGAGATGGAGGATAAGGTGGAAGCAGTAA 432 0.4769 MNLSSLTSSLTLSNPKPLFHSLPLSNKRQLITPVKVAAVSCSATAINNNDNNFYKMLSLSTESATMEEIKIAYRSMALRYHPDVCRDASMKEESNRMLVQLNAAYETLSNPHLRAEYDCKLSGSRSRLSVGCSDERWRIRWKQ 143
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2705 143 SMART dnaj_3 51 113 IPR001623 -
Glsi11g2705 143 Gene3D DnaJ domain 38 137 IPR036869 -
Glsi11g2705 143 PRINTS DnaJ domain signature 55 73 IPR001623 -
Glsi11g2705 143 PRINTS DnaJ domain signature 73 88 IPR001623 -
Glsi11g2705 143 PRINTS DnaJ domain signature 93 113 IPR001623 -
Glsi11g2705 143 SUPERFAMILY Chaperone J-domain 48 117 IPR036869 -
Glsi11g2705 143 CDD DnaJ 52 110 IPR001623 -
Glsi11g2705 143 ProSiteProfiles dnaJ domain profile. 52 121 IPR001623 -
Glsi11g2705 143 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 21 127 - -
Glsi11g2705 143 Pfam DnaJ domain 52 118 IPR001623 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi11g2705 Glsi-ChrGlsi11 20075719 20076150 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2705 54 118 C2H2 Transcription Factor Family AT1G74250 41.791 6.42e-07 45.8