Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2704 ATGAGGGTTTCCGTTTCCTGTTCTGCCACTGCCATTAACACCGACGACAGCAACTTCTACAAGATGCTCTCTCTCACCCCCGAAAGTGCAACCGCGGCTGAGATCAAGAGAGCTTACAGATCCATGGCCCTTCGTTACCACCCGGACGTGTGTCGTGACGCATCCATGAAGGAGGAGTCGAACAGGATGTTGGTGCAGCTCAATGCGGCTTACGAGACGCTCTCGAATCCCCGGCTTCGCGCCCAGTATGACTGCGAACTGTCGGGTTCGAGGAGTCGATTAAGTGGTAGACACAGTGACGAGAGATGGAGGAGGACGTGGGAGGAGCAATTGGTCGAGTTAATGAGAAGGTCTAATACACGCACGGCAGAGAGTTGGAGATCTTCGTGGGGGAGTTCTATGAGAGCTCACAAAATGAGAAACCAGAACTGA 432 0.5324 MRVSVSCSATAINTDDSNFYKMLSLTPESATAAEIKRAYRSMALRYHPDVCRDASMKEESNRMLVQLNAAYETLSNPRLRAQYDCELSGSRSRLSGRHSDERWRRTWEEQLVELMRRSNTRTAESWRSSWGSSMRAHKMRNQN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2704 143 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 10 142 - -
Glsi11g2704 143 ProSiteProfiles dnaJ domain profile. 18 87 IPR001623 -
Glsi11g2704 143 SUPERFAMILY Chaperone J-domain 12 83 IPR036869 -
Glsi11g2704 143 PRINTS DnaJ domain signature 59 79 IPR001623 -
Glsi11g2704 143 PRINTS DnaJ domain signature 39 54 IPR001623 -
Glsi11g2704 143 PRINTS DnaJ domain signature 21 39 IPR001623 -
Glsi11g2704 143 SMART dnaj_3 17 79 IPR001623 -
Glsi11g2704 143 Pfam DnaJ domain 18 84 IPR001623 -
Glsi11g2704 143 Gene3D DnaJ domain 4 114 IPR036869 -
Glsi11g2704 143 CDD DnaJ 18 76 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2704 Glsi-ChrGlsi11 20070478 20070909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2704 20 84 C2H2 Transcription Factor Family AT1G74250 40.299 5.89e-07 45.8