Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2679 ATGGATAACTTCTGTTGCTTCAATTCTGTCACTAAGGTGGTTGGAGGGCGTTCTTCATGTAGCTCTGGCAAGGGCAGAAGCCATGAGTGCCCCGTCAAGTATGGCTTTAGCCTAGTCAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCAAAGTTTGTCCAGCTCAGAGGACATGAGCTAGGACTTTTTGCTATATATGATGGGCACTTGGGAGACAGTGTACCAGCCTATCTACAAAAGCATCTCTTTTCTAATATATTAAAGGATGAGGACTTCTGGACTGATCCAAACAGGTCTATCATTAAAGCTTATGAAATAACAGATCAGGCAATTCTAACTCACAATCCTGATCTGGGAAGAGGTGGATCAACTGCAGTGACTGCAATTCTTGTAGATAATCGGAAGTTATGGATAGCCAATGTTGGAGATTCACGAGCGGTTCTATCAAGGGGAGGATTGGCCATACAGATGACTACTGATCACGAGCCCAATACTGAGCGGGACAGCATTGAGGACAAAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGCCAGCTTGCAGTTTCTAGAGCATTCGGAGACAAAAACCTCAAATCGCACTTGCGGTCTGATCCTGACATACGGCATGCTGATGTTAACCCAGATACCGAGCTTTTGATACTTGCAAGTGATGGTCTATGGAAGGTAATGGCAAATCAAGAGGCAGTTGATATTGCAAGAAGGATTAAGGATCCACAAAGGGCAGCCAAACAACTAGCTACTGAGGCATTGAACAGAGACAGCAAGGATGATATTTCCTGCATTGTAGTTCGTTTCAACTTCAAGGGATGA 855 0.4468 MDNFCCFNSVTKVVGGRSSCSSGKGRSHECPVKYGFSLVKGKANHPMEDYHVAKFVQLRGHELGLFAIYDGHLGDSVPAYLQKHLFSNILKDEDFWTDPNRSIIKAYEITDQAILTHNPDLGRGGSTAVTAILVDNRKLWIANVGDSRAVLSRGGLAIQMTTDHEPNTERDSIEDKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIRHADVNPDTELLILASDGLWKVMANQEAVDIARRIKDPQRAAKQLATEALNRDSKDDISCIVVRFNFKG 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2679 284 CDD PP2Cc 32 280 IPR001932 -
Glsi11g2679 284 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Glsi11g2679 284 SMART PP2C_4 29 278 IPR001932 -
Glsi11g2679 284 FunFam Probable protein phosphatase 2C 39 23 281 - -
Glsi11g2679 284 SUPERFAMILY PP2C-like 27 281 IPR036457 -
Glsi11g2679 284 Gene3D - 29 283 IPR036457 -
Glsi11g2679 284 SMART PP2C_SIG_2 44 280 IPR001932 -
Glsi11g2679 284 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Glsi11g2679 284 PANTHER PROTEIN PHOSPHATASE 28 280 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2679 Glsi-ChrGlsi11 19818757 19824341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2679 1 280 PP2C-type Phosphatase Gene Family AT1G22280 73.077 2.22e-152 425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2679 11 19818757 19824341 Glsi11g2679 11 19818757 19824341 CCT
Glsi11g2679 11 19818757 19824341 Glsi11g2679 11 19818757 19824341 ECH