Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2649 ATGACTTCCCTTCTTCATCCACATGTTCAACCAAAAGCTACCTACTGGGAACCGAATAATAGCTCTAGAGTTGTACAAACCAACCCAGACTTCATTGTCCCATTTGAGAACGAATCCATCAAGCCAACAGAAAGCAGCAAAGATATTCCCAGTATGGATGACGGAGTGTTATTGACATGGGAGGACTTGTGGGTGACTGTTCCAAATGGAAAGAATAGGAAGCCAATTCTGCAGGGTCTCACTGGATATGCCAAGCCAGGAGAGCTTTTGGCTATAATGGGTCCCTCTGGATGTGGCAAAACCACACTCCTCGATGCTTTAGCAGGAAGATTGGGTTCAAACACAAAGCAAACAGGGAAGATTCTAATCAACGGCCACAAACAAGCACTAGCTTATGGAACATCAGCATATGTAACACAAGATGATGCTATGCTGTCAACTTTAACTGCTGGAGAAGCTTTATATTACTCATCTCAGCTCCAACTTCCGGATTCGATGTCCATTGAAGAGAAGAAGGAGAGAGCAGACTTTACACTCAGAGAAATGGGTCTCCAAGATGCCATTCACACAAGGATAGGAGGGTGGACTTCTAAAGGCCTGAGTGGGGGACAAAAGAGGAGACTTAGCATTTGCATAGAGATTCTGACACGTCCGAGACTTCTCTTCCTTGATGAACCAACTAGTGGGCTTGACAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCCAGTCTAAGCCTAAGGGATGGCATTCAAAGGACTATTGTTGCATCCATCCATCAGCCCAGCAGTGAAGTTTTTCAACTCTTCCATAACCTCTGCCTTCTGTCTTCTGGTGAAACAGTATATTTTGGCCCTGCTTCTGCTGCAAATGAGTTTTTTGCTTCAAATGGTTTTCCTTGCCCAACTCTCTACAATCCTTCAGATCATTTCTTAAGGATCATAAACAAGGATTTTGAACAGGATGCCGAAGAAGGCTTTGGTAAAGGAGTAACCACAGAAGAAGCAATTAATATCCTTGTAAAGTCCTATATGTCTTCTGAAATTCGTAATCAAATTCAGAAGGAAGTGGAAGAAATAAGTGAAAGTGATTCTGGTGCAATGGAGAAGAAAAGAATCCACGCTGCATTCCTCACTCAGTGTCTCATTCTTATTAGAAGATCTTCCCTGCATATGTATCGCGACATAAGCAATTACTGGTTACGTCTAGTTGTATATGCTGCAATAGCTTTGAGTCTGGGCACTATCTTCTATGACATTGGCTCGAGTACAGGATCTATTCAGGCTAGAGGGTCACTGCTCACTTTTTTTATTTCAGTCCTTACTTTCATAACCCTTATTGGTGGATTCCCTCCATTTTTGGAGGAAATGAAGGTATTTAAACGAGAGAGATTGAATGGACATTACGGAGTTACTGCTTTTCTCATTGGCAACACATTCTCTGCTGTTCCATACATGCTACTAATATCTCTAATTCCTGGAGGAATAGCTCAATCCCTTTCTGGGCTGCACAAAGGACTTGAACACTTTCTGTACTTCATTCTGGTGCTGTTTGCTACTGTCATGTCTGTTGAGAGCCTCACGATGGTTGTTGGGAGCATGTTCCCCAACTTCATAATAGGCATGATAATTGTTGGAGGAATTCAAGGAGTCATGATTTTGATTGGTGGATTCTATAGACTCCCAAACGATCTTCCCAAGCCATTTTGGAGATACCCTTTATACTATGTCTCCTTCCACAAGTATGCCTTCCAAGGACTGTTCAAGAATGAATTTGAAGGTTTAACATTTGCTACAGATCAAGATGGAGATACTAAACCCATTAGTGGTAGAGACATTTTGAAAAACACGTGGCAGGTGGAAATGGGTTACTCCAAGTGGATTGATCTTGCTATCTTGCTTGCAATGATTGTTCTGTATCGGCTTCTGTTCTTGGCCATTACAAAGAGCAAGGAGAAGTCACTGCCTATGGTTGCAGCTATCAGTTGTCCCCGGGCAAAACTTTTCTCTAGAGTGACTAGAAGCAATGAGCACAATTAG 2040 0.423 MTSLLHPHVQPKATYWEPNNSSRVVQTNPDFIVPFENESIKPTESSKDIPSMDDGVLLTWEDLWVTVPNGKNRKPILQGLTGYAKPGELLAIMGPSGCGKTTLLDALAGRLGSNTKQTGKILINGHKQALAYGTSAYVTQDDAMLSTLTAGEALYYSSQLQLPDSMSIEEKKERADFTLREMGLQDAIHTRIGGWTSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLSLRDGIQRTIVASIHQPSSEVFQLFHNLCLLSSGETVYFGPASAANEFFASNGFPCPTLYNPSDHFLRIINKDFEQDAEEGFGKGVTTEEAINILVKSYMSSEIRNQIQKEVEEISESDSGAMEKKRIHAAFLTQCLILIRRSSLHMYRDISNYWLRLVVYAAIALSLGTIFYDIGSSTGSIQARGSLLTFFISVLTFITLIGGFPPFLEEMKVFKRERLNGHYGVTAFLIGNTFSAVPYMLLISLIPGGIAQSLSGLHKGLEHFLYFILVLFATVMSVESLTMVVGSMFPNFIIGMIIVGGIQGVMILIGGFYRLPNDLPKPFWRYPLYYVSFHKYAFQGLFKNEFEGLTFATDQDGDTKPISGRDILKNTWQVEMGYSKWIDLAILLAMIVLYRLLFLAITKSKEKSLPMVAAISCPRAKLFSRVTRSNEHN 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2649 679 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 303 IPR003439 GO:0005524
Glsi11g2649 679 FunFam ABC transporter G family member 11 56 343 - -
Glsi11g2649 679 Pfam ABC-2 type transporter 379 592 IPR013525 GO:0016020|GO:0140359
Glsi11g2649 679 Gene3D - 55 299 IPR027417 -
Glsi11g2649 679 Pfam ABC transporter 78 228 IPR003439 GO:0005524
Glsi11g2649 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 292 IPR027417 -
Glsi11g2649 679 ProSitePatterns ABC transporters family signature. 200 214 IPR017871 GO:0005524|GO:0016887
Glsi11g2649 679 Pfam ABC-2 type transporter 260 366 IPR043926 GO:0140359
Glsi11g2649 679 SMART AAA_5 86 275 IPR003593 GO:0016887
Glsi11g2649 679 CDD ABCG_EPDR 55 285 - -
Glsi11g2649 679 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 51 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2649 Glsi-ChrGlsi11 19229794 19233020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2649 87 238 Calmodulin-binding Proteins AT2G36910 31.056 1.70e-08 56.2