Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2648 ATGAGTTGTTTTCTATCTCCACCTGATCTCAAAGCTACGGAAACATACATTAATGACTCATCAAAACAGGGGCAGAGAAGCTTGGAGAATAGCACTAAAATGGAGGAGAGAGGAGGAGGGTTAGCTGTGCAAATTCAGGTAGCAGAAGAAGAGGGTATTTCTTTGACATGGGAGGATCTGTGGGTGACCATGCCGAGCAGAAAAGGTGGCTCCAAATCAATCCTTCAAGGTCTTACTGGTTATGCAAAGCCAGGGCAGCTATTGGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTCCTTGATGCCTTAGCAGGTAGGTTGGGCACAAAGGCAAAGCAGACAGGAGATATCCTAATCAATGGCCACAAACAAGCATTGGCCTATGGAACATCAGCATATCTGACCCAAGAAGACGCAATATTGACTACATTAACGGTTGGAGAAGCAGTGTACTACTCTGCTCAACTCCAACTGCCTGACACAATGTCTCAGTCAGAGAAGAAGGAGAAAGCAAACTTTACCATCAGAGAAATGGGTCTGCAAGATGCCATTCACACAAGGATTGGAGGATCTGGTTCTAAAGGCATTAGTGGGGGTCAAAAGAGGAGGGTTAGCATCTGCATTGAGATCATAACACGCCCTAGCCTTCTGTTCCTTGATGAACCAACCAGTGGGCTTGATAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCCAGCTTGAATGAAAAGGATGGCATTCAGAGGACTATTATTGCTTCGATCCATCAGCCAAGCAGCGAAGTTTTTCAGCTTTTTCACAACCTTTGTCTTTTGTCTTCTGGTCAAACAGTGTACTTTGGCCCTGCTTCTGCTACAAACGAGTTTTTTGCGTCAAATGGTTTTCCCTGCCCAACTCTCCAGAACCCTTCTGATTATTTTGTAAAAACCATCAACAAGGATTTTGAGCTGGAGGACCCTGAGCAAGGACTATCCGGAGGACTAACCACAGAAGAAGCTATTCATATCCTTGTGAAATCATTCAAGTCATCTGCAATCAGTCATCAAGTTCAAACAGAAGTAGCTAAAATAAGAAAAAGGGATTCTAGTGCAATGGAGAACAAAAGCCATGCTCCCTTCTTTAAGCAGTGCCTCATTCTTACAAGAAGATCATTTGTGAATATGTATCGCGATATAGGCTACTACTGGTTACGGCTACTTATCTATGGTGCATTGGCTGTAAGTCTAGGTACAATCTTCTACAATATTGGCTCAAGCAGTGAATCTGAATCAATTCAGGCTAGAGGTTCACTGCTCATGTTTGTGGCTACATTCCTGACTTTCATAACCATTGGTGGGTTCCCTTCCTTTGTGGAGGATATGAAGGTATTTCAAAGAGAAAGACTAAATGGCCATTATGGTGTCACAGCATACATCATTGGGCATACATTCTCTGCTATTCCATACTTGCTATTGATGTCACTGATTCCAGGAGCCATCGTTTATTACCTAACTGGACTTCACCCAGGATGCCAACACTTTCTCTACTTTACTTCTGTGCTTTTTGTTTCTGTAATGTTGGTTGAGAGTCTTATGATGATTGTAGCAAGCATGGTTCCCAATTTCTTGATGGGCATAATCACTGGTGCTGGAATTTTGGGAGTAATGATGCTGAATGGCGGATTCTATCGCCTACCCGCTGATCTGCCCAAATTCGTTTGGAGATATCCTTTATACTACATTTCTATTCACAAGTATGCCTACCAAGGATTGTTCAAGAACGAGTTTGAAGGTCTAACGTTTACTAACAATCAAGTTGGGGGGTCTATGACCATTAGTGGTAAGGAAATGCTGAGAAATTCATGGCAAGTGGAAGTGGATCACTCGAAGTGGGTCGATCTTTCCGTCTTGCTGGGAATGGTAGTTCTGTATAGAATTTTGTTCTTGGTCATCATCAAGAGCATTGAGAAGGTGAAGCCTATTGTTGCAGCCTTTAAGTGA 1986 0.43 MSCFLSPPDLKATETYINDSSKQGQRSLENSTKMEERGGGLAVQIQVAEEEGISLTWEDLWVTMPSRKGGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGTKAKQTGDILINGHKQALAYGTSAYLTQEDAILTTLTVGEAVYYSAQLQLPDTMSQSEKKEKANFTIREMGLQDAIHTRIGGSGSKGISGGQKRRVSICIEIITRPSLLFLDEPTSGLDSAASYYVMSRIASLNEKDGIQRTIIASIHQPSSEVFQLFHNLCLLSSGQTVYFGPASATNEFFASNGFPCPTLQNPSDYFVKTINKDFELEDPEQGLSGGLTTEEAIHILVKSFKSSAISHQVQTEVAKIRKRDSSAMENKSHAPFFKQCLILTRRSFVNMYRDIGYYWLRLLIYGALAVSLGTIFYNIGSSSESESIQARGSLLMFVATFLTFITIGGFPSFVEDMKVFQRERLNGHYGVTAYIIGHTFSAIPYLLLMSLIPGAIVYYLTGLHPGCQHFLYFTSVLFVSVMLVESLMMIVASMVPNFLMGIITGAGILGVMMLNGGFYRLPADLPKFVWRYPLYYISIHKYAYQGLFKNEFEGLTFTNNQVGGSMTISGKEMLRNSWQVEVDHSKWVDLSVLLGMVVLYRILFLVIIKSIEKVKPIVAAFK 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2648 661 Pfam ABC-2 type transporter 258 313 IPR043926 GO:0140359
Glsi11g2648 661 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 301 IPR003439 GO:0005524
Glsi11g2648 661 ProSitePatterns ABC transporters family signature. 198 212 IPR017871 GO:0005524|GO:0016887
Glsi11g2648 661 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 37 658 - -
Glsi11g2648 661 Pfam ABC-2 type transporter 378 591 IPR013525 GO:0016020|GO:0140359
Glsi11g2648 661 Gene3D - 54 373 IPR027417 -
Glsi11g2648 661 MobiDBLite consensus disorder prediction 14 34 - -
Glsi11g2648 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 289 IPR027417 -
Glsi11g2648 661 Pfam ABC transporter 76 226 IPR003439 GO:0005524
Glsi11g2648 661 SMART AAA_5 84 273 IPR003593 GO:0016887
Glsi11g2648 661 MobiDBLite consensus disorder prediction 14 28 - -
Glsi11g2648 661 FunFam ABC transporter G family member 11 53 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2648 Glsi-ChrGlsi11 19222114 19226230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2648 65 286 Calmodulin-binding Proteins AT2G36910 27.193 4.52e-10 61.2