Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2621 ATGGTTAAGGAAGACAGTTCTTGGCCTCGTCCACTGTGTGTGGCTTGGCAGTCACCTTATTTGAATTGCTCTAGCACATTGCCAGAGCCTAGGCTATGTGGCCTTCCAGCACACCCAAATGCTAGCACCTGCATCTTTCCTGGACACAATGCTTTTCCAGAATTCACAGTTCCTGCTTTATCAAGTCTGGAGACTGGGCAAACAGATGAATTGCAAGGATACTTTCATTTACCAGAAGAGTCTGATATAAATCATATAAATAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATTAATGCATTACTTGACTCAGATGAAGATGTTGATGATTATATCGATGACGATGAGGTAACAAGTACAGGTTGTTCACCATTGGCTACTAAAAGGACTTATGTGATACAAGAACAGTTTGAGAATATGAAGGAGGAGGTTGCTAGCTCTGAACGGCCAAACAAAAGGCAGAAGTTAATTGATGATGGATACGAAAAATCATCACCCATCAACAGTGCTAGATCAGTAAGACTGAATGAAACTAGTGAGTATGTCAGTGATGCAGAATCAAATTATTCCAGTGGCCAAAGTTTTTTTGTTCAGCAAAGTCAGGGAGGAGAGAATTTAATGGTGGGTGATATTCAATTGAAAAAGGATAAGATCCGTGAATCATTGAGAAATCATTATCTTTTAGCTTTTGGAGGGTTAAAGAACAAAAGTCACATATTGAATGAATGGGAGATGGTAGTGGTGGGCTATGCTGTAAATGAGGACACTTTTTCCTCAAGTGGAGCGTGGTTTGGCATCATGACTTGTTGGGGCCCTTTCTTAAATATACCCTTCGTGGTAAAGGTTGCTTTGTTTTACATGCTGAGGTTGGAGTAG 882 0.4014 MVKEDSSWPRPLCVAWQSPYLNCSSTLPEPRLCGLPAHPNASTCIFPGHNAFPEFTVPALSSLETGQTDELQGYFHLPEESDINHINNEESEMHEDTEEINALLDSDEDVDDYIDDDEVTSTGCSPLATKRTYVIQEQFENMKEEVASSERPNKRQKLIDDGYEKSSPINSARSVRLNETSEYVSDAESNYSSGQSFFVQQSQGGENLMVGDIQLKKDKIRESLRNHYLLAFGGLKNKSHILNEWEMVVVGYAVNEDTFSSSGAWFGIMTCWGPFLNIPFVVKVALFYMLRLE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2621 293 Coils Coil 86 106 - -
Glsi11g2621 293 MobiDBLite consensus disorder prediction 143 170 - -
Glsi11g2621 293 MobiDBLite consensus disorder prediction 143 162 - -
Glsi11g2621 293 PANTHER TRANSCRIPTION FACTOR BHLH145 14 77 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2621 Glsi-ChrGlsi11 18976196 18977833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2621 84 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 42.484 1.54e-07 50.1