Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2610 ATGGCATTTCCTGCACCAATCTCCATTTCAGGAGACCCCTTTGCTTCCAACCCTCTAGCTTTTTCGTCCAGTTCCTGCTTTGAGCTTCCTGGAGTTTTATTGAACACATCGAGGATCTTTGATAGAAAGGTGAAAGCAAGGAAAATGGAGAAAACCCATTTCAGATTTTTGACGGATTTAAGGAGCAGTCAAGGTTTATCTTTAAAGGCTTCTATGGGACCTCAAGGATTTACTCAAAAACTTGAAAACAACAAGCTAGAGACTGTGACCGAAGCTAAAAATGGGTGTGATATATTCAATGATCTCAAGGATAAGTTTTTAAGATTCAAAAAGAATAACTACATGGAAAACATAGAACAGTTCCAAAATCTTGCCAAGGGTCAAGCACCAAAGTTCATGGTTATTGCTTGTGCAGATTCTAGGGTATGCCCCTCTAATATTCTGGGATTTCAACCAGGAGAAGCATTCATGATTCGCAATGTTGCTAATTTGGTACCTCCATTTGAGAGTGGACCCTCAGAAACAAATGCTGCATTAGAATTCGCTGTAAATTCCCTTAGAGTTGAGAACATCTTAGTCATTGGCCACAGCTGCTGTGGGGGAATTCGTGCCCTTATGAGTATGCAAGATGATGCAAATGAAAGCTTTATAAAAAGTTGGGTTGTTGTTGGGAAGAATGCAAGAACAAAAACTCAAGCTGCTGCTTCTTTTCTGGGCTTTGACCAGCAGTGCAGGCACTGTGAGAAGGAATCAATTAACCACTCCTTATCAAACCTACTTAGTTACCCATGGATAGAAGAAAAGGTAGCAAACGGAGAACTTGTTATTCATGGTGGATACTACGACTTTACTGACTGTACATTTGAGAAGTGGACATTGGATTACAGGGAAAGCCAAATGAAGAAAAATAGAGGGTTTACTGTCAAAGACAGAATGCTTTGATCAACAAATTTCTGGTCGGTGTTGAACACAAAGAAAGCTTTTTTAAAGTGTCCATACTTTACGGCTGAGGCTAAATCAAGTACCCCCCCTGACAATGATCCACATAAAATGAAAAGGATAACAGTTCAACTACAAGGCAGGATCAAAGATTGTCGGGCACTTACATATAGACAGGATGGTATTTTAGATCATGATGAAGCTATAAACGAATTGTCCGTGGTCAGGTCCTTGTGTTTTTTCATTGAAAGTATTATCCTCTTATTGCATTGTACTGTTAGCGGCAATTACTTCGTAGAATTTTCTGGAAATTGGAAAATTGGAAATACAGGTGGGGGTTGTATGAAGGTAGATTCTAGCTTGCTTGATGTAGGTGACCTGGATGAGAAGGCTGAGTTCATCGCCTCCAGACCAGAACTAGTTAATGTGCACAGAGCAAGAAATTGGAAACTCCGATTGATCTGCAAGATCTTGTTATCTGCTTGCTCCATTCACATGGCTTCCCATAATTTCTCATCATTCATTTTACCTCTTTTGCTTCTTCTAACTTTCTCTTCAACGACCACCCACCTAATGGTTGCAGGGGCGAGAAATCTTCTTGAACCAACTTTGCCAGAGCCAAAAGTGCCTGAGCTTCCATCCTTGACAAAGCCTGAGATACCCCAAGTACCTGAATTTCCAAAGCCAGAATTGCCTCAACCGCCCAAGGTTGAGCTGCCACCATTGCCAAAGCTAGAGGTACCTAAAGTCCCTGAAATTTCCAAGCCAGAGATGCCCAAAATCCCTGAGATCCCTAAGCCAGATTTGCCTCAACTACCTAAAGTTGAGCTACCACCATTGCCGAAGTTAGAAGTACCTAAAATCCCTGAAAATTTCAAGCCAGAGTTCTCCAAAATCCCTGATGTCTCTAAGCCAGAATTGCCTGTTGTACCAACACTAGAAGCGCCTAAAGTTCCTGAAATTCCCAAACCAGAGTTGCCTAAAGTGCCTGAAATTCCCAAACCAGAGTTGCCTAAGGTGCCTGAAATTCCCAAGCCAGAGTTTCCTGCAATGCCAAAGTTAGAAGTACCTAAAGTTCCTGAAATTCCGAAACCCCACTAA 2040 0.4162 MAFPAPISISGDPFASNPLAFSSSSCFELPGVLLNTSRIFDRKVKARKMEKTHFRFLTDLRSSQGLSLKASMGPQGFTQKLENNKLETVTEAKNGCDIFNDLKDKFLRFKKNNYMENIEQFQNLAKGQAPKFMVIACADSRVCPSNILGFQPGEAFMIRNVANLVPPFESGPSETNAALEFAVNSLRVENILVIGHSCCGGIRALMSMQDDANESFIKSWVVVGKNARTKTQAAASFLGFDQQCRHCEKESINHSLSNLLSYPWIEEKVANGELVIHGGYYDFTDCTFEKWTLDYRESQMKKNRGFTVKDRMLXSTNFWSVLNTKKAFLKCPYFTAEAKSSTPPDNDPHKMKRITVQLQGRIKDCRALTYRQDGILDHDEAINELSVVRSLCFFIESIILLLHCTVSGNYFVEFSGNWKIGNTGGGCMKVDSSLLDVGDLDEKAEFIASRPELVNVHRARNWKLRLICKILLSACSIHMASHNFSSFILPLLLLLTFSSTTTHLMVAGARNLLEPTLPEPKVPELPSLTKPEIPQVPEFPKPELPQPPKVELPPLPKLEVPKVPEISKPEMPKIPEIPKPDLPQLPKVELPPLPKLEVPKIPENFKPEFSKIPDVSKPELPVVPTLEAPKVPEIPKPELPKVPEIPKPELPKVPEIPKPEFPAMPKLEVPKVPEIPKPH 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2610 679 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 137 144 IPR015892 GO:0004089|GO:0008270|GO:0015976
Glsi11g2610 679 SMART Pro_CA_2 125 292 IPR001765 GO:0004089|GO:0008270
Glsi11g2610 679 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 180 200 IPR015892 GO:0004089|GO:0008270|GO:0015976
Glsi11g2610 679 MobiDBLite consensus disorder prediction 646 671 - -
Glsi11g2610 679 MobiDBLite consensus disorder prediction 518 556 - -
Glsi11g2610 679 FunFam Carbonic anhydrase 94 300 - -
Glsi11g2610 679 MobiDBLite consensus disorder prediction 571 592 - -
Glsi11g2610 679 SUPERFAMILY beta-carbonic anhydrase, cab 95 298 IPR036874 GO:0004089|GO:0008270
Glsi11g2610 679 Pfam Carbonic anhydrase 133 285 IPR001765 GO:0004089|GO:0008270
Glsi11g2610 679 Gene3D Carbonic anhydrase 89 301 IPR036874 GO:0004089|GO:0008270
Glsi11g2610 679 MobiDBLite consensus disorder prediction 533 556 - -
Glsi11g2610 679 MobiDBLite consensus disorder prediction 569 592 - -
Glsi11g2610 679 CDD beta_CA_cladeB 106 291 IPR045066 GO:0004089|GO:0008270
Glsi11g2610 679 PANTHER CARBONIC ANHYDRASE 44 301 IPR001765 GO:0004089|GO:0008270
Glsi11g2610 679 MobiDBLite consensus disorder prediction 630 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2610 Glsi-ChrGlsi11 18832379 18838821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2610 346 394 Cytoplasmic Ribosomal Protein Gene Family AT2G19720 40.260 9.30e-10 55.5