Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2604 ATGCATAATTTTCTCCTTTCTAGATTCCATGCTTCAAATACGTTTAGAAGAAAGACCCAACTGTGTTTTCTCCCGCAAAATGCTTTCTTTATTTTCAGTTCATTCTCGTCCAAAGCAAAACTAGAAAAAGAAGATCCTTTTACGGTGTCTTACCTTATCAATTCATGTGGGCTTTCCCCCCATGTAGCCATCAAAGCATCTAAAAGAATTTGTTTGAAAAATCCTGATACAGCAGACTCGGTTCTTAGACTTCTGAAGAACTCTGGCTTTTCTGAATCTCAGGTATCTCAAATTGTGAAGCGCCTCCCATCACTCCTATCATCAGATCCTGATGAAACCCTTTTGCCCAAACTCAAGTTCTTGCAGTCTGTGGGGCTTTCTAGCACTGACCTTCCTGAAGTTCTCGTTTCTAACCCACAAATCTTAAAAAGGAGCTTAAGCCAGTGGCTTATTCCCCGTTGTGGAATCTTTAGGAGTGTGCTTTCGAACGACGACGAAGTAGCCCAAGCTTTGAAATGCGCAGTATGGGATTGGGCTGATAGTGGTGTGGGAGATGATGTAGTTAAAAACATAAAGCTTTTGCGAGAACTTGGAGTGCCTCAACATTTGATCTCTTTCATGGTAACTCGTTTTCCAGATGTTGTGTTTAAAAAACATACAGAGTTTGCTGAAGCAGTGAATTCGGCTAAAGAAATGGGGTTTGATCTTGAGAAATCATGGTTTGTGTTAGCAGCCCAAGTGCTTGCAAAATTGAAGAAATCAGAGTGGGAGTCAAGGTTGGAGGTATTTGAGAGTTGGGGTTGGTCTCGGGATGTCGCACTGTCAGCATTCAAAAAGTTTCCAAATTGTATGTTGATATCTGATAAGAAGATCAGAAAAGGAATGAATTTTCTTGTGAACGAAATGGGTTTCTCAGCATTAGATATTGCTGAATTCCCAGTGGTTCTTTCTTACAGCTTGGAGAAGAGGATCATCCCTAGATGCATGCTCGTTCAAACTTTGAAATCTAAGGGCTTGGTGAAGAATGATTTGAGTCTTGCCTATGTCCTAAATTTAAGTAAGAATAAATTTTTGGACTTATATGTGGCCAGATTTCGGGACCCTGGTAATGCTCCTTCAAATGTTATTCAGCCTTAG 1137 0.4046 MHNFLLSRFHASNTFRRKTQLCFLPQNAFFIFSSFSSKAKLEKEDPFTVSYLINSCGLSPHVAIKASKRICLKNPDTADSVLRLLKNSGFSESQVSQIVKRLPSLLSSDPDETLLPKLKFLQSVGLSSTDLPEVLVSNPQILKRSLSQWLIPRCGIFRSVLSNDDEVAQALKCAVWDWADSGVGDDVVKNIKLLRELGVPQHLISFMVTRFPDVVFKKHTEFAEAVNSAKEMGFDLEKSWFVLAAQVLAKLKKSEWESRLEVFESWGWSRDVALSAFKKFPNCMLISDKKIRKGMNFLVNEMGFSALDIAEFPVVLSYSLEKRIIPRCMLVQTLKSKGLVKNDLSLAYVLNLSKNKFLDLYVARFRDPGNAPSNVIQP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2604 378 PANTHER CGI-12 PROTEIN-RELATED 45 363 IPR003690 GO:0003690|GO:0006355
Glsi11g2604 378 FunFam Mitochondrial transcription termination factor-like 146 368 - -
Glsi11g2604 378 Pfam mTERF 250 358 IPR003690 GO:0003690|GO:0006355
Glsi11g2604 378 Pfam mTERF 82 243 IPR003690 GO:0003690|GO:0006355
Glsi11g2604 378 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Glsi11g2604 378 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Glsi11g2604 378 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Glsi11g2604 378 SMART mt_12 132 164 IPR003690 GO:0003690|GO:0006355
Glsi11g2604 378 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Glsi11g2604 378 Gene3D Transcription termination factor 3, mitochondrial 49 176 IPR038538 -
Glsi11g2604 378 Gene3D Transcription termination factor 3, mitochondrial 180 366 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2604 Glsi-ChrGlsi11 18744599 18745735 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi11g2604 mTERF 1e-22 No_clan