Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2583 ATGAAAGTTAGGAATTTCAAGTCATTGAGACCTGAGAAAACTGCTGTAAGAAATAATTATATTGCAGTAATTGAACCATCTTGGAGGCAGCGCAACCCTCCGAGGGTTCCCAATCTTATTGGAGGCAGATTTGTTGATTCGCAGTCATTCACATCATTTGATATATTAAACCCTGCAAACCAACAAGTTGTTTCTCAAGTTCCAATGACTACAAATGAGGAGTTTAAAGCTGCTGTATTTGCAGCAAAACGGGCTTTTTCCATGTGGCGTAACACACCAATTAGCACTCGACAGCGGATTATGTTTAAGTTCCAAGAGCTTATTCGTAGAGACATTGATAAGATTGCTATGAGTATTACTACTGAACATGGCAAAACATTGCAAGATGCATATGGTGATTTGTTACATGGGCTAGAGGTGGTTGAACATACATGTGGTCTGAGAAATCTGCAAGCCGGGGATTTTGTTCCCAATGTATCCAGTGGCATCGACACATACAGTATTAGAGAGCCCCTTGGTGTTTGTGCTGGGATCTGCCCTTTTGACTTTCCAGCTATGATTCCCTTATGGATGTTTCCTATTGCTGTCACTTGTGGCAATACATTTATTCTAAAGCCATCAGAGAAGAATCCAGGGGCATCTGTGATGCTGGCAGAGTTAGCAATAGAGGCTGGTGTACCTAATGGTGTGTTAAATATTGTTCATGGTACAAATGACATTGTAAATGCTATCTGTGATGATGACGATATCAAGGCTATCTCATTTGTTGGTACAAATGCAGTTGGTGCATATGTATATGCAAGAGCATCGGCTAAAGGGAAACGTGTTCAGTCCAATATTGGAGCAAAAAATCATGCTGTTGTAATGGCTGATGCAAGAAGGGATTCTACTTTGAAAGCCCTAGTTGCAGCTGGTTTCGGTGCTGCTGGACAAAAGTGCACAGCCCTGAGTGCTGTTGTCTTTGTTGGAAGTTTCAATCTATGGGAAGATAAACTGGTAGAGCTCGCTAAAGCACTTAAGGTAAATGCTGGAACAGAACCATATACAGACCTTGGTCCAGTTATTAACAAAGAGGCAAAGGAACACACTTGCAGATTGATTCAAACAGCAGTGGAATCTGGTGCAAAACTTGTTCTTGATGGAAGAAATATTGTGGTTCCAGGATATGAACAAGGAAACTTCATTGGTCCCACCATCTTATCTGATGTCACAGTTAACATGGAGTGCTACAAGGAGCAAATTATTGGTCCAGTTCTTCTTTGTATGCAGGTTGACAGCATAGAAGAGGCGATAAACATCATCAATAGAAACAAATATGGTAATGGAGCTTCAATATTTACATCTTCTGGGGCAGCTTCAAGGAAATTCCAGACAGAGGTTGAAGTTAGGCAGGTTGGCATAAATGTTTCAATTTCCGTTGCATTGCCCTTTTCCTCATTTCTAAGCTCCAAGCCATCTTTTGCCGGTGATTTGAATTTTGATGGCAAGGCTGGAATTCAGTTTTACACCCAGATGAAGACAGTAACTCAACAATGGAAAGACTCATTGGATGAGGATGAAGCACCTCTTGGAATGCCTCTTTCTTAG 1587 0.4115 MKVRNFKSLRPEKTAVRNNYIAVIEPSWRQRNPPRVPNLIGGRFVDSQSFTSFDILNPANQQVVSQVPMTTNEEFKAAVFAAKRAFSMWRNTPISTRQRIMFKFQELIRRDIDKIAMSITTEHGKTLQDAYGDLLHGLEVVEHTCGLRNLQAGDFVPNVSSGIDTYSIREPLGVCAGICPFDFPAMIPLWMFPIAVTCGNTFILKPSEKNPGASVMLAELAIEAGVPNGVLNIVHGTNDIVNAICDDDDIKAISFVGTNAVGAYVYARASAKGKRVQSNIGAKNHAVVMADARRDSTLKALVAAGFGAAGQKCTALSAVVFVGSFNLWEDKLVELAKALKVNAGTEPYTDLGPVINKEAKEHTCRLIQTAVESGAKLVLDGRNIVVPGYEQGNFIGPTILSDVTVNMECYKEQIIGPVLLCMQVDSIEEAINIINRNKYGNGASIFTSSGAASRKFQTEVEVRQVGINVSISVALPFSSFLSSKPSFAGDLNFDGKAGIQFYTQMKTVTQQWKDSLDEDEAPLGMPLS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2583 528 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 281 481 IPR016163 GO:0016620
Glsi11g2583 528 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 38 512 IPR010061 GO:0004491
Glsi11g2583 528 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 281 481 - -
Glsi11g2583 528 Pfam Aldehyde dehydrogenase family 44 508 IPR015590 GO:0016491
Glsi11g2583 528 CDD ALDH_F6_MMSDH 36 512 IPR010061 GO:0004491
Glsi11g2583 528 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 306 317 IPR016160 GO:0016491
Glsi11g2583 528 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 40 487 IPR016162 GO:0016491
Glsi11g2583 528 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 2 527 IPR010061 GO:0004491
Glsi11g2583 528 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 40 287 - -
Glsi11g2583 528 SUPERFAMILY ALDH-like 28 513 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2583 Glsi-ChrGlsi11 18543499 18553524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2583 5 496 Aldehyde Dehydrogenase Gene Family AT2G14170 70.791 0.0 727