Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2578 ATGAAGTCCATTATTGAACGCTATAATAGCCACAAGGATGATGACAAGAGGCTCTTGAACCCTGCTTCAGAAATCAAGTTTTGGCAGAGAGAGGCAGCAAGTTTAAGGCAACAACTGCAGTATGTGCAACAATGCAACAGGCAATTGATGGGCCAAGAACTATCTGGTTGTAGCATAAAAGACCTGCGAAATCTGGAAGGCCAATTGGATATGAGTTTAAAGAGTGATGCAAATAAAGCAAAAAATAGCTCTCGGCTTCAATGTACCGCCACTGGCAATGAACTTTCTTCGAATGCACCTATATATATCCAGATAACTGAGCCTCAGCCTCGGCCTCTTAACCAAGTAATGCCGGCGAAACCAATGAAACTGGGGTACCTCCTTTTAACCATTTCCATACTGGATAACACTGAAGTGGTAGTTATTAACGATCATTTCTTATTTCTTACTTGA 453 0.415 MKSIIERYNSHKDDDKRLLNPASEIKFWQREAASLRQQLQYVQQCNRQLMGQELSGCSIKDLRNLEGQLDMSLKSDANKAKNSSRLQCTATGNELSSNAPIYIQITEPQPRPLNQVMPAKPMKLGYLLLTISILDNTEVVVINDHFLFLT 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2578 150 Pfam K-box region 24 75 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2578 Glsi-ChrGlsi11 18449904 18452180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2578 1 82 MADS-box Gene Family AT4G37940 51.220 6.09e-25 93.6