Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2571 ATGGAGCTGAATAGCATTAAAGATGCATTTGACCGTGTATCTAAGAAGCAAAAGTTATCTTCTTCCAAGTCTCAACAAGTCATTGATCAGGTGGGGCTCGAAATTGAGCAGGTGTTGGCAAAATTCCAGTCAGCTCATGACTCCTCAGGCCCTGTTGATCAGAAATCCATTCTTACAGAACTCAAGTTTAAGCTTAATGCTATGGGGGCACTTCAACAGTCAGAAGAAGCACAGAAGGAACTGAACATAAGTCCCACCAACAGCTTATATGAGGAATATGCATCGAATTTGGTGGAAGGTGATTCTGATGAATTGCCTGATCAAAAGTTCAAAAATTACTGTACAGAAGTGGAGTCAACGGCAATATGGGGAGGACAACTAGAGCTTGGTGCCTTCACTCACTTCTTGAAAAAGCACATTAAGATATTTTTAGGGTCCTTCCCGGATGTGGAGATGGGGAAAGCGTACAAATCAGATGATGTATTGATTGGTTCTGACTTAATTGATATGAGATTGGTTTTGCTTTTTGCTCTGAATTTGTATATAAAGTCTTATGAGTGCCTTTTGAAGCTTCTGAACTTCATAATGACCCTTGTTGGTCTGAACTTCATAAAGTTGGAGCTCCTTGCCGTGTTGATTAACAAGGGTACTGTAGAAATTATCACCCCTGTGAAACTCATTAGAAAGGGTGATAAGGTTGGCTCTTCTGAAGCTGCTTTGCTTGCAAAACTTGGGATTAGGCCCTTCTCATATGGGCTTGTTGAAAATATGCTTAGATCTCTTATTCTATCTTTTCAGATTGCATCAGTCCATTCCTAG 819 0.4042 MELNSIKDAFDRVSKKQKLSSSKSQQVIDQVGLEIEQVLAKFQSAHDSSGPVDQKSILTELKFKLNAMGALQQSEEAQKELNISPTNSLYEEYASNLVEGDSDELPDQKFKNYCTEVESTAIWGGQLELGAFTHFLKKHIKIFLGSFPDVEMGKAYKSDDVLIGSDLIDMRLVLLFALNLYIKSYECLLKLLNFIMTLVGLNFIKLELLAVLINKGTVEIITPVKLIRKGDKVGSSEAALLAKLGIRPFSYGLVENMLRSLILSFQIASVHS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2571 272 Gene3D - 202 250 IPR043164 -
Glsi11g2571 272 Gene3D - 70 174 - -
Glsi11g2571 272 Pfam OTU-like cysteine protease 107 153 IPR003323 -
Glsi11g2571 272 SUPERFAMILY Cysteine proteinases 91 153 IPR038765 -
Glsi11g2571 272 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 203 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2571 Glsi-ChrGlsi11 18283920 18302868 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2571 213 254 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 95.238 3.02e-19 84.0