Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2559 ATGGAGAATTACTCGTACCCTTCATACCCAGATTCAGGTGACTCCTCTCCACGCTCTAGAGAGGTTGAATTCGAGAACCCACCGCCGTGGGACGACCAGCAACCACCGCCTAATTACAAAGTTAAATTCATGTGCAGCTATGGCGGCAAGATCCAACCTCGCAGCCATGACAACCTTCTCTCCTACGTCGGCGGCGAGACAAAGATCCTTGCTGTTGACCGGAACATCAAGTTCCCCGCCATGATTTCCAAGCTCTCCGCCATCTGCGACGCCGAAGTTACCTTCAAGTACCAGCTCCCAGGTGAAGAACTCGACGCTTTGATTTCTGTCTCCAACGACGATGATCTCGAGCACATGATGCATGAGTACGATCGACTCTACCGACCTTCAGCTAAGCCTGCTCGGATGAGGCTCTTCCTTTTCCCTGTCAATAATCAGCCAGCGAGTTTTGGGTCCGATCAAGATCGCTTCGTGGAGGCTCTGAACACAGGTCCTGCTTCGACCCCACCCGACCCGGTTAAGCCCGCGCCTGTCCCGGGCAGCAACGTCGATTTTCTTTTCGGTCTCGACAAAGGTGCTCCTCCTGCCCCGCCACCACCCGCAGCCGTGAAGTTTCATGATGCGACTCAGGGGCCTGTGGTGCCACCGCCCGAGTACCAAGTTCGGGGAGGCCCTGGTGGGCGGGTCGTAGGGTCGGATCCTGGTGCGAACCCACTTGAGATTCAGCGGCAGTTCCAGCAGATGCAAATTGCGGAGCATGATCAAACTGCGTACCGGAGAAAAAGCGAGGACAACATACCTGGAGGCTACGCTGCTGGAGATTATTATGTACAAAAGTTCGCTGAAAAGGCTCCTCCGTCTAATTTCCCTGCTAACGCGCCACACCCGGGTGGTTATTGGCCGGAAAAGCAAATTTCCAGCGAGAGTTTTCCGACTACGGCATCAAACGCCCCCGGAGGAGGGGACCATCCAGTTTATGTAATCCCGCAGCCGGGAACATTCTATCATGCGCCGGTGATGCGTCCACCGACGGCACCAGCCACTCAAGGGTACTACACAGTGCAGCGAATGGTTTCTGACGGTTACCGTGAACAACCGATGTACAACGCGGTGCCATCCGCCAGAGCGCCATTTTCATCACCGGCTCCGGCAAACTTGGCACCGGCTCAACCGGTTAAACCCACATATACAGAAGGGTTTAGTGTCGTTCGACAACCTGGGATGCCGGATAATACAGCTGGGTACGCGCAGGTGGCGTACGATGGTGCAGCTGGGAGACAGGTTTACTATACTGCGCAGGGAGGGGTGGTCCCGTCACCGTACCAGGGGGTTGCTCAGGCGGCCGGCGCTGATATAAGACCAGTTGGAGTATCACTGGGTCAGGATCTTAAAGTGGCAAACAAGGTTTCACAAGGTTCAGTGTGA 1425 0.5544 MENYSYPSYPDSGDSSPRSREVEFENPPPWDDQQPPPNYKVKFMCSYGGKIQPRSHDNLLSYVGGETKILAVDRNIKFPAMISKLSAICDAEVTFKYQLPGEELDALISVSNDDDLEHMMHEYDRLYRPSAKPARMRLFLFPVNNQPASFGSDQDRFVEALNTGPASTPPDPVKPAPVPGSNVDFLFGLDKGAPPAPPPPAAVKFHDATQGPVVPPPEYQVRGGPGGRVVGSDPGANPLEIQRQFQQMQIAEHDQTAYRRKSEDNIPGGYAAGDYYVQKFAEKAPPSNFPANAPHPGGYWPEKQISSESFPTTASNAPGGGDHPVYVIPQPGTFYHAPVMRPPTAPATQGYYTVQRMVSDGYREQPMYNAVPSARAPFSSPAPANLAPAQPVKPTYTEGFSVVRQPGMPDNTAGYAQVAYDGAAGRQVYYTAQGGVVPSPYQGVAQAAGADIRPVGVSLGQDLKVANKVSQGSV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2559 474 MobiDBLite consensus disorder prediction 1 37 - -
Glsi11g2559 474 SUPERFAMILY CAD & PB1 domains 56 147 - -
Glsi11g2559 474 MobiDBLite consensus disorder prediction 1 15 - -
Glsi11g2559 474 CDD PB1_UP2 44 141 - -
Glsi11g2559 474 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 143 - -
Glsi11g2559 474 Gene3D - 61 142 - -
Glsi11g2559 474 MobiDBLite consensus disorder prediction 288 321 - -
Glsi11g2559 474 PANTHER OS05G0427100 PROTEIN-RELATED 9 379 - -
Glsi11g2559 474 SMART PB1_new 55 143 IPR000270 GO:0005515
Glsi11g2559 474 Pfam PB1 domain 60 142 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2559 Glsi-ChrGlsi11 18172239 18173663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2559 39 163 MAP Kinase Kinase Kinase AT5G57610 42.857 7.07e-28 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2559 11 18172239 18173663 Glsi11g2559 11 18172239 18173663 CCT
Glsi11g2559 11 18172239 18173663 Glsi11g2559 11 18172239 18173663 ECH