Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2554 ATGACATCAGAATCAGCCACGAATACCAAAAGACAAGCTTATCCAAAACTAGGCCAAAGGATTAGCTTATTTGCTTGTTATGCAAAAATGCAGGTTTTTGTGGGCAAAAATGCAGGTGCAGCAAGTCCACCCTTTCACCCATCATGCAAAGCCACATGTTCTCTAGCTGGTTCGCCTGGTTTGGAACACCTTTCTTTTGCTCCCACTATCTCTGGCTGGAAAGGATTCTGTTTCTCAAAGTGTAGGCCATTACAATGGGAACGGTTGCGGGCAAGTGCAGCATATGATGTCGCTGGTGCTGTCGAAGTCGTCAATGATTTGGGATTGGATACTCTTACATTCTTGACTGTGACTGTCTTAATTGTGCCCACATTCAAGTGTCTTATGGAGTCTGCAAGGATCATGTTTTGTCTGTTTGAGATGGGTTTAGAGCTTTCACTTGAGGGTCTGAAAGCTCTTGCTAAATATGCCTTTGGGATTGGATTGCTTCAGGTGAATATTAGAAGTGTTGATGAAGCTTTAGTAATTGGTGGTGCTCTATCCTTGTCTTCTTCTGCGTTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAACTTCCTACAAGATTCGGTTCAGCAACTCTGGGAATTCTTCTTATGCAGAATCTGGCTGAGGAAAGTATTTCGTCAATGCTTTCTCAACAAAGTTTAAAGGCATTAGGTGGATTGGGTCTGCTTTCTCTTGGGGGAAAGTACATTCTTAGAAGAGTTTTTGAGGTTGTTGCAGATTCAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACCATTGCTGGGACTTCACTCTTCACACAGAAGTTGGGCTTTAGTAATACGCTTGTTGCATTTTTAGCTGGGGCACTCTTAGCAGAGTCAAATTTTAGGACACAGATCGAAGCAGAAATAAGACCTTTTAGAGGCTTGCTTCTTGGTTTAATTGTTATCAAGACATTGGTTGTCACAGCAATAGGTCCTCGCATTGGACTTACTTTACAAGAAAATGTAAGAATAGGGTTACTTCTATCCCAAGGAGGGGAGTTTGGATTTGTGGTTTTCTCTTTAGCAAATGGTCTTGGGGTGCTACCGCTTGAGCTCAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCGTTAACCCCACTTCTTAATGAAGCTGGAAGAAGAGCTGCTGATTTTATTGATGACAAGTTTGATACTGAGAATAAAACTTCTGAGATGGTTAATTTCAATGCCAGTGAACCTGTTGTTATCCTCAGGTTTGGACAAATGGGCCAGGTAGATCAATCGCTACCCTATATGAGCTGTCATTTATATGGCCTATGTTCTAAACTTACTCCTTTTGGTTCTGATATGGAGGTCCTTGCCAATTTCCTGGCCAATCCATTGGCTTCAGGAGGAGATAGTGATGCCGTGGGATGGCCTTATGTAGCTTTTGATCTTGACCCTATAGTGGTAAAGGCAGCTAGAAGCCTTGGTTTTCCAATTCTGTACGGGGATGGATCACACCCAGCTGTTCTTCAATCTGTGGGTGTCTCTTCCCTGAAAGCTATCATGACTCCAATCTATGCCAGAGCTCAAGATCTCAAGCATCCTTTAGATTTGAAGAAAGCAGGTGCAAAAAAATGCTATTTTGGAAAAAGCAGAGTCAGCTTATTCGAGATTCCATGGAGCTACAAGCTCAAGAAGCACTCACCACTCCAAGTGAGAGTTGGTGATTTGATTGAGGCACGTGTACCTATGGCGACAACTATACCAGAATTTGAATTGCCAGAACTGCACCAGACAGATAAAGCTTTGGTAGCTGCAATTCAGACAGAAGTAGATTCTGAAGAACAAGATCATGAACTCAGTCAAGGTGGGAGTTCAGAAGGATGTGTTATTCTATATAGCAAACAAGAGACTGAGGAAAGCTCAATGGATGCACTAGGAGAGAATAATCCGTTGGACCCATGA 1974 0.4265 MTSESATNTKRQAYPKLGQRISLFACYAKMQVFVGKNAGAASPPFHPSCKATCSLAGSPGLEHLSFAPTISGWKGFCFSKCRPLQWERLRASAAYDVAGAVEVVNDLGLDTLTFLTVTVLIVPTFKCLMESARIMFCLFEMGLELSLEGLKALAKYAFGIGLLQVNIRSVDEALVIGGALSLSSSAFVLQLLAEKGELPTRFGSATLGILLMQNLAEESISSMLSQQSLKALGGLGLLSLGGKYILRRVFEVVADSRSSEAFVALCLLTIAGTSLFTQKLGFSNTLVAFLAGALLAESNFRTQIEAEIRPFRGLLLGLIVIKTLVVTAIGPRIGLTLQENVRIGLLLSQGGEFGFVVFSLANGLGVLPLELNKLLIIVVVLSMALTPLLNEAGRRAADFIDDKFDTENKTSEMVNFNASEPVVILRFGQMGQVDQSLPYMSCHLYGLCSKLTPFGSDMEVLANFLANPLASGGDSDAVGWPYVAFDLDPIVVKAARSLGFPILYGDGSHPAVLQSVGVSSLKAIMTPIYARAQDLKHPLDLKKAGAKKCYFGKSRVSLFEIPWSYKLKKHSPLQVRVGDLIEARVPMATTIPEFELPELHQTDKALVAAIQTEVDSEEQDHELSQGGSSEGCVILYSKQETEESSMDALGENNPLDP 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2554 657 Pfam Sodium/hydrogen exchanger family 135 319 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi11g2554 657 Pfam TrkA-N domain 473 526 IPR003148 GO:0006813
Glsi11g2554 657 Gene3D - 454 559 - -
Glsi11g2554 657 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 133 319 - -
Glsi11g2554 657 Gene3D - 128 397 IPR038770 -
Glsi11g2554 657 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 479 551 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2554 Glsi-ChrGlsi11 18117886 18144016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2554 87 558 Inorganic Solute Cotransporters AT4G04850 54.983 0.0 537