Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2537 ATGCCTAATACAAGAATCTTCTTGTGGTTCTTGGTCTGTCTCTTTAACGTAGGTCTTGGAGCTGAGGGCGATAATAAATCATCTGATTTATCATTTTGGTACAGTTTTGCTATTGCTTATGTTTGTTCAGCAACCTCAGTCATAGTTGCTTTCATGTACCATTATAAGCCTTGGACAGAGTTGAAGAAAAGGAGCAGAAGAAAAGCTATGTCTTCCACCAGAAGAAAGAAGCAGAAACAGAGCATTCAAACTGGCACTAGAAGAGTACCTGAGTTGCTATCAACGGCTATGCAAGAGCAAGGAAGCAAAGAGCTATCAACATTGTTGGAAAGATTTGTTTCTAGAATGAACTTTGGAGCACTATGTGAGGCTACCAATAACTTCAACGCAGACAATGTCATAGGACTGGGAACGACGGGGATGATGTACAAGGCAATGTTACCAAATAACTGTTTCCTAGCAGTTAAAAGACTATATGATCCTCAACTCTACAAGAGAGAATTCTTGCTAGAAACCATGATTCCAGGGAGATACACACACTCGAACATAGTTCCTCTGGTTGGATTCTGTGTGGACAAAAAGGAAAGGATTCTGGTGTATAAGTACATGTCAAATGGAAGGCTTCAAGATTGGCTAGAATGTTCTGAAGGATCCCACCAACAACCCATGATATTAATGGAATGGCCTGTGAGGGTTCATATTGCACTAGGGCTTGCAAGAGGCTTATCTTGGCTCCACAAAAAGTGCAACATAGTACATCTAAATCTGAAATCTGAGTGTGTTCTTCTGAACAAACACTTTGAACCCAAAATTTCTAAGTTTGGCAAGGCAAAGTTCATCAACCACACATTAATTGAGGATCATTTGAGGATGAATTTTTTAATTGGGGTGAAGGGTTGTGTTGGGAAGGATGTCTATGGCTTTGGAATTATTCTTTTTGAGCTCATAACTGGGAAGAGATTAAGTGCAGGCATTAATGATTCTTCTGATAGTGTTGATAGATCTTTGATGAAATATATCAGTAGGAACTTGTTCAGTGGTCCGAATGATTTTTATAATGCCATTGATGGATCTCTGATTGGTAAAGGGCTTGATGATAAAATTCTTGGTCTACTTCAAGTCGCATGTGAATGTGTTCAGCCTAGTTTAGAGCAAAGGCCAAAGATGGTTGATGTGTATAAAGCTATAAGAGCTATGTCGGAGGGGTATGGCTATGATTCTGGGAGGCTAAAGCTATCAAGGGTTTGTCCTATTGATCAGATAACATGTAATAACGAAATTGAATGTGTTGGTTGA 1296 0.3935 MPNTRIFLWFLVCLFNVGLGAEGDNKSSDLSFWYSFAIAYVCSATSVIVAFMYHYKPWTELKKRSRRKAMSSTRRKKQKQSIQTGTRRVPELLSTAMQEQGSKELSTLLERFVSRMNFGALCEATNNFNADNVIGLGTTGMMYKAMLPNNCFLAVKRLYDPQLYKREFLLETMIPGRYTHSNIVPLVGFCVDKKERILVYKYMSNGRLQDWLECSEGSHQQPMILMEWPVRVHIALGLARGLSWLHKKCNIVHLNLKSECVLLNKHFEPKISKFGKAKFINHTLIEDHLRMNFLIGVKGCVGKDVYGFGIILFELITGKRLSAGINDSSDSVDRSLMKYISRNLFSGPNDFYNAIDGSLIGKGLDDKILGLLQVACECVQPSLEQRPKMVDVYKAIRAMSEGYGYDSGRLKLSRVCPIDQITCNNEIECVG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2537 431 Gene3D Phosphorylase Kinase; domain 1 89 202 - -
Glsi11g2537 431 MobiDBLite consensus disorder prediction 66 85 - -
Glsi11g2537 431 SUPERFAMILY Protein kinase-like (PK-like) 108 395 IPR011009 -
Glsi11g2537 431 Gene3D Transferase(Phosphotransferase) domain 1 203 406 - -
Glsi11g2537 431 ProSiteProfiles Protein kinase domain profile. 128 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2537 431 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 58 397 - -
Glsi11g2537 431 Pfam Protein kinase domain 130 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2537 Glsi-ChrGlsi11 17996028 17998950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2537 107 405 Receptor kinase-like Gene Family AT1G69990 33.762 4.01e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Glsi11g2537 Pkinase 1.1e-23 CL0016