Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2526 ATGTCCACTGTCCGTACCCTTCTAACCGTTTCATGTATAAAATCCCATTCCCTTCCTTCTCCCGTTAAGGCTATTAAAGCAGAGCTTACAGATTCAGCAGATTATATAGCAGTAGCATCAAATCTGGGCATGGCAGAGGAGTTTCAAGCTGGGATTTGTGGTGGGAAATATTGGTGGAATTTCAATTCAACCAAAAGTGTTTTCCCTCTGACCATCTCATCACCCTGTTCTATGGCAGCTAACGATGCAGAGAACTTTAGTTCTTGGCAAATTGATCATAGTTTGGTGTCTGATCATTCTCTGGGTTTTCTTGACGAACAGAAGCCCCAGCAGAGTGAATCAGCTTCCACTTCTTCACAAATGATGGGTTTTGGAGTCTCATCTTCAACTTCATCGAATTGGAATCAGTCTCTTCTAAGGCTGGAAAGCAATTTCCAATCTGTGCTTCAAGAGGACATGGATTCTTCTAATTCACAAATCCAAAAGGATTGGAGTCCAACAAAGGGCTTCTCAACTTCCAACATTGATGATGCTTTCAAGCCCATGAACCCAGAATTTTGCTTAGACCAGCAGAGTCTGAGTTCATATGGGTACACTTCAAAGATGATGCAAAGCCTATACGATCACCCTCATCCTGATCCACAACCGCAGAACTCACTTTTCACCAACCAATCTATGGCCTATAGTTCAACATCCAATGAAGTATTACCAACTTGGTCTATAGTCTCTCCCTTTTTGAAGCCAGAGCAGCAGCCTAGTGGATTGCACTTTTCCAACAATAATACTCCTCCTTTTTGGAATAATGCTTCTTCGACTGAGGCACTTGATCATGACACTCGAGCAGATGTCTTTGCTTCACCACAAGGTCAATATCAATCTCAACCACTTGAAGAGGAACCCACCTGCCCAACTCTCATAACCAAGCCTAAGAGAGAAGAGGCTGTGGATTCAGCTCAAGGGGTGAAGAGAAGTGTTTGTGAACCTGCTTCATTCAAAAGGCCAAGAATTGAAACCCCATCACCACTGCCAACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGAATCACTGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGACCGATACAGCATCTGTTCTTCACGAAGCTATCGAGTACATCAAGTATCTTCATGATCAAGTTTTGAGTGCTCCATATATGAACAATGGAGCTCCCATCCAACACCAACAGGGTTCTTGTGATGATCAGAATGAGTCAGAAGGGCCAAAACAAGATTTAAGAAGCCGAGGATTGTGCTTAGTGCCGATATCAAGCACTTTCCCAGTTGCTAATGAGATCGCTGCTGAATTATGGACGCACACACTTGGAGGCGCACTCATCGGGTAG 1371 0.4376 MSTVRTLLTVSCIKSHSLPSPVKAIKAELTDSADYIAVASNLGMAEEFQAGICGGKYWWNFNSTKSVFPLTISSPCSMAANDAENFSSWQIDHSLVSDHSLGFLDEQKPQQSESASTSSQMMGFGVSSSTSSNWNQSLLRLESNFQSVLQEDMDSSNSQIQKDWSPTKGFSTSNIDDAFKPMNPEFCLDQQSLSSYGYTSKMMQSLYDHPHPDPQPQNSLFTNQSMAYSSTSNEVLPTWSIVSPFLKPEQQPSGLHFSNNNTPPFWNNASSTEALDHDTRADVFASPQGQYQSQPLEEEPTCPTLITKPKREEAVDSAQGVKRSVCEPASFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKYLHDQVLSAPYMNNGAPIQHQQGSCDDQNESEGPKQDLRSRGLCLVPISSTFPVANEIAAELWTHTLGGALIG 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2526 456 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 336 385 IPR011598 GO:0046983
Glsi11g2526 456 MobiDBLite consensus disorder prediction 396 420 - -
Glsi11g2526 456 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 99 436 - -
Glsi11g2526 456 FunFam Transcription factor bHLH123 family 346 406 - -
Glsi11g2526 456 MobiDBLite consensus disorder prediction 396 412 - -
Glsi11g2526 456 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 346 391 IPR036638 GO:0046983
Glsi11g2526 456 CDD bHLH_AtbHLH_like 342 389 IPR045239 -
Glsi11g2526 456 Gene3D - 346 392 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2526 Glsi-ChrGlsi11 17931331 17933992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2526 44 452 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 41.435 1.32e-67 219