Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2518 ATGGGCATGATTAAAGGACACTCTGCTTCTGCTACATTTTTTCTGTTCTCGTTCTTCTTCATCCTCTGTTTTCTTGCTCTGTTTTCCTATGCAGCCAATTCAATCTCAAAAGGCGAATTGATCAGAGATGGTGACACTGTGGTCTCAGACGGGCTCAATTTTGAACTGGGTTTCTTCAGTTTCGGTAATTCATCGCCAAGATACGTTGGGATTTGGTACTATAACATTCCCGGACCGTCAGTGATATGGGTTGCAAACAGAGGCAATCCCATCAGAGACAGAGGAGGGGCTATAACAATTGGGAGTGATGGGAATTTGGTTATCTTTGACGGAGAAAAGAATAAAGTCTGGTCTAGTAATGTATCAATCCCGAGGAACAACTCGCAAGCTATTCTTCGCGATGATGGAAACCTTCTTCTTTCGAGCATGGAGGATAACAAAGAGGTATGGCGGAGCTTTGAGCACCCAACAGATACATTTCTACCTGGTATGAAGGTGCCAGTGAAGGCTTCAATTGGGGAGCTACGTTCTTTTATTTCCTGGAAATCTGCTATAGATCCTTCACCAGGAAACTATACAATGGGGGTTGATCGCAGGGCATCACCCCAGATAGTGATTTGGGAAGGGGACAAAAGGAGGTGGAGAAGTGGGTATTGGGATGGTAGAATCTTCACAGGTGTGTCAAATATGACGGGAAGTTATCTCTATGGTTTTAGACTTAACGACGAAAATAACCAAGATAGGTACTTTACATATAGTCCATTGAACAGCTCTGACAAGTTAAGGTTTCAGATAGGATGGGATGGACACGAAAGGCAGCTCAAGTGGAATGGAGATGAGAAACAGTGGGTTGCTACACAAACTGAGCCTTTCAACGATTGTGAGCTTTATAACAAGTGTGGGGGTTTTGGGGTTTGCAGTTTATCCAATTCACCTATCTGTAGTTGCATAAAAGGGTTTGAACCAATGCATTGGGATCAGTGGCATAATGGGAACTGGTCGGGTGGGTGTAAAAGGACAACCCCATTAAAGGCTGAGCAGAATTCTAGTATTGGAACACAGAAAAATGTTGGAGAAGATGGTTTCTTGACGCTGAAGTGTACGAAGTTGCCAGATTTCGCAACTTTGGTGCTTGATGGTGGCGGTGGCAGTGGCATTTTCACTAGCACAGAGGATTGTCAGAATAAATGTTTGCAGAATAATACTTGTACTGCATATGCTAATGTTAATGGAATTGGGTGCATGATTTGGTACGGGGAGTTAGTTGATATTCAACACTTTGAATATGGAGGAAATTGGATGTTCATCCGCCTCGCTGATTCTGATTTAGGTGGTGTGGAGAAAAAGACCAAGGTGGTGATAATATCAGTAGCTGTGGCAGCAGGATTAATCTGCCTAGGAATCTGTGTATGGCTAGCATGTATATTCAAGGGAAAACTCGAAGCTTCAAGTTCCAAGAATGGCGGTATACCTATTTTTGTTGCAAACAAGAGTAGAGACTTCTCGACAGAGCTTTCAGGATCAGCTGACTTTGGTGTTGAAGGGAATCAACTAAGTGCACCAGAACTGCCATTCTTTAATTTTGAATGCATTGCAAGAGCTACAAACAATTTCTCAGAAGAAAATAAGCTTGGGCAAGGGGGATTTGGTCCTGTCTACAAGGGAAATCTTCCAGGGGGAGAACAAATAGCAGTCAAGAGACTTTCAAGAAGGTCTGGCCAAGGTTTAGAGGAGTTCAAGAATGAGATGTTATTAATAGCCAAACTACAACATCGAAATCTGGTTAGGCTAATGGGATGTTCCATTCAAGGGGAGGAGAAGTTGCTGGTATATGAATACATGCCAAACAAAAGCTTGGATTGTTTTTTATTTGTTAAAATCATGGCAGATCCAATTGGACAAACAAAACTCAACTGGAAAAAACGCTTTGAAATCATTGAAGGCATTGCAAGAGGGCTACTTTATTTGCACCGGGATTCGAGACTTCGAATTATTCATCGAGATTTAAAACCAAGCAACATTTTATTGGACGAAAACATGAACCCAAAAATTTCAGACTTTGGCTTGGCAAGGATCTTTGGGGGAAACCAGAATGAAGGCAATACAACTAGGGTGGTTGGCACATATGGCTATATGTCTCCCGAATATGCAATGGAAGGTCTCTTTTCAGTGAAGTCTGATGTTTACAGTTTTGGTGTGTTACTACTTGAGATTGTGAGCGGTCGCAGGAACACAAGCTTTCGCCATACAGATGACTCAAGTCTCATAGAATATGCCTGGCATATTTGGGATGAACACAGAGCATTGGAGCTTGTTGATCCCTCAATCCGTGATTCAACTCCCAGAAATAAAGCTTTGAGATGCATACAGATAGGGATGTTGTGTGTGCAGGATTCTGCTGGTCATAGACCAACCATGTCTACTGTGATGTTGATGCTGGAGAGTGAAACAACAACTCTTCCATTGCCAAGGCAACCTATGCTTACTTCCATGAGGAGATCTGAAGATAGAGAGTTTCTCACAGAAGGCCTTGATGCTTCCTCAAATGATGTGACAGTCACTATGGTAGCTGGAAGATAA 2580 0.4248 MGMIKGHSASATFFLFSFFFILCFLALFSYAANSISKGELIRDGDTVVSDGLNFELGFFSFGNSSPRYVGIWYYNIPGPSVIWVANRGNPIRDRGGAITIGSDGNLVIFDGEKNKVWSSNVSIPRNNSQAILRDDGNLLLSSMEDNKEVWRSFEHPTDTFLPGMKVPVKASIGELRSFISWKSAIDPSPGNYTMGVDRRASPQIVIWEGDKRRWRSGYWDGRIFTGVSNMTGSYLYGFRLNDENNQDRYFTYSPLNSSDKLRFQIGWDGHERQLKWNGDEKQWVATQTEPFNDCELYNKCGGFGVCSLSNSPICSCIKGFEPMHWDQWHNGNWSGGCKRTTPLKAEQNSSIGTQKNVGEDGFLTLKCTKLPDFATLVLDGGGGSGIFTSTEDCQNKCLQNNTCTAYANVNGIGCMIWYGELVDIQHFEYGGNWMFIRLADSDLGGVEKKTKVVIISVAVAAGLICLGICVWLACIFKGKLEASSSKNGGIPIFVANKSRDFSTELSGSADFGVEGNQLSAPELPFFNFECIARATNNFSEENKLGQGGFGPVYKGNLPGGEQIAVKRLSRRSGQGLEEFKNEMLLIAKLQHRNLVRLMGCSIQGEEKLLVYEYMPNKSLDCFLFVKIMADPIGQTKLNWKKRFEIIEGIARGLLYLHRDSRLRIIHRDLKPSNILLDENMNPKISDFGLARIFGGNQNEGNTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRRNTSFRHTDDSSLIEYAWHIWDEHRALELVDPSIRDSTPRNKALRCIQIGMLCVQDSAGHRPTMSTVMLMLESETTTLPLPRQPMLTSMRRSEDREFLTEGLDASSNDVTVTMVAGR 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2518 859 Gene3D - 27 153 IPR036426 -
Glsi11g2518 859 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 504 613 - -
Glsi11g2518 859 Gene3D Phosphorylase Kinase; domain 1 509 613 - -
Glsi11g2518 859 Gene3D Transferase(Phosphotransferase) domain 1 614 821 - -
Glsi11g2518 859 ProSiteProfiles PAN/Apple domain profile. 367 439 IPR003609 -
Glsi11g2518 859 CDD STKc_IRAK 544 814 - -
Glsi11g2518 859 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 187 IPR036426 -
Glsi11g2518 859 Pfam PAN-like domain 358 424 IPR003609 -
Glsi11g2518 859 SMART serkin_6 538 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2518 859 PIRSF SRK 5 859 IPR024171 GO:0004674
Glsi11g2518 859 CDD PAN_AP_plant 354 439 - -
Glsi11g2518 859 ProSiteProfiles Protein kinase domain profile. 538 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2518 859 Pfam D-mannose binding lectin 81 182 IPR001480 -
Glsi11g2518 859 SMART blect_4 38 156 IPR001480 -
Glsi11g2518 859 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Glsi11g2518 859 SUPERFAMILY Protein kinase-like (PK-like) 523 836 IPR011009 -
Glsi11g2518 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 664 676 IPR008271 GO:0004672|GO:0006468
Glsi11g2518 859 SMART ntp_6 357 438 IPR003609 -
Glsi11g2518 859 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 614 821 - -
Glsi11g2518 859 Pfam Protein tyrosine and serine/threonine kinase 541 810 IPR001245 GO:0004672|GO:0006468
Glsi11g2518 859 CDD B_lectin 39 156 IPR001480 -
Glsi11g2518 859 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 804 - -
Glsi11g2518 859 ProSiteProfiles Bulb-type lectin domain profile. 32 153 IPR001480 -
Glsi11g2518 859 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2518 Glsi-ChrGlsi11 17835414 17839733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2518 515 859 Receptor kinase-like Gene Family AT4G23140 53.911 1.30e-127 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi11g2518 PK_Tyr_Ser-Thr 1.4e-46 CL0016