Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2471 ATGGATGTTGTTGGGTCCGTGGCAAGCATCATGAGCTGCTTGTGTTCAAATAACTCACTGCAAGAATCACTTGCACGGCAGTGTAGACACCTTAGAAAACCAAGAAAGAATTTAAATAAGCTGAAAGAACTAGTGGAACTGCTAGAGGCCAGGAGAGTTGATGTAAACACTAAGCTAGATCAAATGTGGCTGGAAAAAGGGATGAAGCCAAAGGAAGAGGTGAAATTATGGGTGAAAAGTATCGATCGAGTTAAACGCAAAGTGAGCAGCCTCACAGACAACAACTACGAGGCCCAAAGAGAAAGCTCGGGTGGCTGTTCCTTCAATTTTGTTTGTTCACGAATAAACTTGGGAGAAGTTATTGAAGAGAATATTAGTGAGGTCAAAGAGGTTCTTGACAAGGGCCAATTCTTAGATGATTCACTGGTCGAAACCTTGCCTAAGATAGGGTATACTCTTCCTGCATCACCCCTATTGGAGTGTGCGACAACGATGCAGAGTTTAACAAGGATTTGCGAATGCTTATCAGAAGAGGGAGTGAAAAGGATTGGAGTTTTCGGGATGGGTGGAGTGGGAAAAACAACTATCATGACAGAAATTAACAACCGTCTATTAAAAGGGACAGATTTTGATTTTGTCATATGGGTAAGTGCTCCAAAAGAGCCAAACCTTGTGAAACTACAGAAGGATATTGCCGCGAAAATGGATTTAGATCTTTCAAGATGCGAGGATGATGTTATTAGAGCAGCCAAGCTATTCGAGGCTCTAAATAGAAGGAGGAGGTTTGCAATGATTCTGGACGATTTATGGGAGCCTTTCTCTCTTGAAAGAGTTGGAATCCCTATACCAACAGTAGAGAATGGTTGCAAGCTGGTAATAACTACTCGACTATTGAGTGTTTGTCGTGGCATGGAGACAGACCAGGATGTAGAAGTGAAGGCTCTTGAAGATGATGAAGCATGGGATCTCTTAAGGAATAAAGTGGGACCACTAGTGTCAAATTCTCCAGAACTACAAATGATTGCACAGGATGTGACAAAAGAATGTGGTGGTTTGCCTCTTGCCATTGTCACAGTTGGACGAGCCCTTAGAAATGCAGCTGATGTGTCAGAGTGGGAGTGTGCATTGGCAGACTTAAGATCCTCAACAGCAAACATTGAAAGGATGGAAGAAGCAGTGTTTGCACACTTAAGGTTTAGCTATGCCAAGCTAAAGGATGACATAAGCCGATCTTGTTTCCTCTTCTGTGCTTTATATCCTGAAGGTCACCAAATCGATACCAACGAGCTGATAGAATATTGGATGTGGGAAGGTTTGTTGGGTTATATTGGGAGAATACCTGCAATCAAGAGGAGGGGAAAAATCATATTGAATGAGTTAAAATATGCATGCTTGTTAGAGGCTCTGACCCAAAATGGAGTGGAATTTGTCAGAATGCATGATTTGATTAGAGATATGGCCATCACAATCATGAGAACGAACCCTCACTGCATAACTAAAGCTGGAACTAGAATGACAAAACATCAATGGATGGAGGAATGGGCAGAAGATGTTCAAAGGGTCTCATTGATGAGAAATGACTTGAAATGTATTCCCTTCAACCTGAACCTAATGTGCCCCAAACTTACTTCTTTATTGCTACAATTCAACTCTTTTTCTGAAAATATATACCATGAATTCTTTGACCATATGCAATTTCTAAAAGTTCTTGACCTCTCCTACACTGGGATTGATTGCTTGCCTGGATCAGTCTCTAATTTGGAGAATCTGTGTGCTTTGTTATTGAGCAATTGTTGGAATTTAACAGCAGTCCCTTCTTTAGCTAAATTGAACAAGTTGATGGCTTTGGATCTCTCTTGCTCTCCAGGAACGAAAGAAATCCCAAATGGAATGGAAAACTTAGGGAATTTGAGACGCTTGAATCTCACCAAGACAGGAATTGAAACCTTCCCGTTCGGATTAATGTCCAAATTCACGCTTTTGGAAGAGTTGTTGATAGGTGGTTGTGGTATCTTGTGGGGATCAATGACAGTCAGGGCTATCAGTGGTGGGGCTTCCATTGAAGAATTCATCTCCTCAAATTTATCTTCTCTTGAAGTAGATTTGTGGAATGTAGATGTCTATGATCAATATACCAAATCTGGTCACTGGGATCACCTGGATAAGTTCAAGATAACAGTAGGGCAGCCCCAAGCACAGTTCTTTGAAGAAAGAAGCTTAGCCTTTGGTGGAAGATTCCTTCTGAGAGGAAACCCAGTTTCTCTACCACCAAACATCTTGGAGTTTCATCTAGATGACTGTGCTGATGTCAAAAATCTAAGCATGTGCTTGCAGAATGTGACAGAGTTGAAATCCTTCAAAATCAGTTGGTGTGATGACATGGAATCCATAGTTGATTCAGAGAACGAGGAAAACACTTTATCCATGCTAGAGAGGATGGAACTATTAGTCTTAGGAAACTTGAAGAAGATATGTGGGGATGTGGTGAGACCAAGCACTCCTATGAGCCTGAAGATCATTAATGTGGAATATTGTCCAAAACTGAATACTCTATTCTCAGGGCAGGTTTTGTGTGAACTTAAAAATCTTGAAGAAATTAGTGTCCGTAATTGTGCTAATATGGAGGACATAATAATGAAAGGAGAAGGAGATGGTGATGCTTCCAGAATTGACTTTCCAAAGTTGAAAAGGCTGAGGCTGAATTATATGCCCAACTTGAAGAGCGTATACAATGGAACCATTCTCTGCCCTTCTTTAAGAAGCCTTCACGTGTTTTCCTGTGATGCTCTAAAGAGCCTGCCCCTTTCTCTATGTGAAGTTGGCACTCACCAGCAGCTATTAGCACCACCTGCACTTGAAGAAATCAAAGGAACAAGAAACTGGTGGGAGTCATTGCAGTGGGATCAACAAGATATTAAATGTATCCTGCAACCCTACTTTGTAGAAACTGGATTATTAGATGGTTTCAGATCCTGA 2976 0.4123 MDVVGSVASIMSCLCSNNSLQESLARQCRHLRKPRKNLNKLKELVELLEARRVDVNTKLDQMWLEKGMKPKEEVKLWVKSIDRVKRKVSSLTDNNYEAQRESSGGCSFNFVCSRINLGEVIEENISEVKEVLDKGQFLDDSLVETLPKIGYTLPASPLLECATTMQSLTRICECLSEEGVKRIGVFGMGGVGKTTIMTEINNRLLKGTDFDFVIWVSAPKEPNLVKLQKDIAAKMDLDLSRCEDDVIRAAKLFEALNRRRRFAMILDDLWEPFSLERVGIPIPTVENGCKLVITTRLLSVCRGMETDQDVEVKALEDDEAWDLLRNKVGPLVSNSPELQMIAQDVTKECGGLPLAIVTVGRALRNAADVSEWECALADLRSSTANIERMEEAVFAHLRFSYAKLKDDISRSCFLFCALYPEGHQIDTNELIEYWMWEGLLGYIGRIPAIKRRGKIILNELKYACLLEALTQNGVEFVRMHDLIRDMAITIMRTNPHCITKAGTRMTKHQWMEEWAEDVQRVSLMRNDLKCIPFNLNLMCPKLTSLLLQFNSFSENIYHEFFDHMQFLKVLDLSYTGIDCLPGSVSNLENLCALLLSNCWNLTAVPSLAKLNKLMALDLSCSPGTKEIPNGMENLGNLRRLNLTKTGIETFPFGLMSKFTLLEELLIGGCGILWGSMTVRAISGGASIEEFISSNLSSLEVDLWNVDVYDQYTKSGHWDHLDKFKITVGQPQAQFFEERSLAFGGRFLLRGNPVSLPPNILEFHLDDCADVKNLSMCLQNVTELKSFKISWCDDMESIVDSENEENTLSMLERMELLVLGNLKKICGDVVRPSTPMSLKIINVEYCPKLNTLFSGQVLCELKNLEEISVRNCANMEDIIMKGEGDGDASRIDFPKLKRLRLNYMPNLKSVYNGTILCPSLRSLHVFSCDALKSLPLSLCEVGTHQQLLAPPALEEIKGTRNWWESLQWDQQDIKCILQPYFVETGLLDGFRS 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2471 991 Coils Coil 81 101 - -
Glsi11g2471 991 Gene3D - 315 400 IPR042197 -
Glsi11g2471 991 Gene3D - 401 488 IPR036388 -
Glsi11g2471 991 Gene3D - 154 314 IPR027417 -
Glsi11g2471 991 Pfam NB-ARC domain 166 401 IPR002182 GO:0043531
Glsi11g2471 991 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 934 - -
Glsi11g2471 991 Gene3D Ribonuclease Inhibitor 489 725 IPR032675 -
Glsi11g2471 991 Gene3D Ribonuclease Inhibitor 804 959 IPR032675 -
Glsi11g2471 991 SUPERFAMILY L domain-like 478 939 - -
Glsi11g2471 991 PRINTS Disease resistance protein signature 585 601 - -
Glsi11g2471 991 PRINTS Disease resistance protein signature 256 270 - -
Glsi11g2471 991 PRINTS Disease resistance protein signature 182 197 - -
Glsi11g2471 991 PRINTS Disease resistance protein signature 349 363 - -
Glsi11g2471 991 Pfam Leucine rich repeat 540 598 IPR001611 GO:0005515
Glsi11g2471 991 FunFam Probable disease resistance protein At5g66910 314 400 - -
Glsi11g2471 991 Coils Coil 38 58 - -
Glsi11g2471 991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 416 IPR027417 -
Glsi11g2471 991 FunFam Probable disease resistance protein At1g61300 159 309 - -
Glsi11g2471 991 FunFam Probable disease resistance protein At1g63360 401 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2471 Glsi-ChrGlsi11 17457043 17460018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2471 180 851 WRKY Transcription Factor Family AT5G45050 22.557 2.14e-13 72.8