Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2448 ATGTGGTTCTCTTGTTTTTTCATCCAGTTGTCTTTGTTTGAACTTTCTAATACGGATATTCTATTAAAAATGACCATTTTCTGCACATTTTTGGCTCATATGCTTCTGCTATCTGTGAAGCCTGTTTTAGCTTCTAGACATAGGCAATGGAGTACTAGCGGGCGGAAACTGAGCTCTGGGTATAATGGGGATCTTGTTACAAACTTGCCTGGGCAGCCTCATGTAGATTTCCAGCACTATGCTGGCTATGTCACTGTGAATGAAACTAATGGAAGAGCACTCTTTTACTGGTTCTACGAGGCCATGTCCAAACCAGAAGAAAAACCATTGGTGCTCTGGCTTAATGGAGGTCCTGGGTGCTCATCTGTGGGGTATGGAGCAACACAAGAGATTGGCCCTTTTTTAGTGGACAATGATGGCCATGGCCTTAAATTAAATAACTTCTCATGGAACAGAGAAGCCAACGTTTTATTCCTGGAATCTCCCGTTGGAGTTGGCTTTTCCTACTCAAACACAACCAGTGATTACGATCAATTGGGAGATGACTTCACAGCTAATGATGCTTACAATTTTCTGCACAATTGGTTTTTCAAGTTTCCATCATATAGAAATCGGACATTTTACATAGCAGGAGAAAGCTATGCGGGAAGGTATGTACCTGAGCTTGCTGAGCTCATCCATGATAGGAACGACAACCCTTCCCTTCATATTGATCTCAAGGGTTTCCTGCTGGGTAACCCAGAAACATCTGATATGGAGGACGTGAGGGGAATTGTTGATTATGCCTGGAGCCATGCTGTGATATCAGACGAAACTCACGAAACAATCAGAAAAACCTGTGATTTTAAGAGTGGTGATCCATGGAGCAATGAAAATTGTAGTCAAGCGGTGGATGAAGTGTACAGACAGTATGATAACATCGATATTTACAGCCTCTACACCTCTGTCTGCTTCGCCAGCACAGCAGGTTCTAAAGATCAATCAATGCAAGCCCTCATGAAGCGCTCATCTAAGATGATGCCTAGAGTCGTGGGTGGTTACGACCCATGCTTGGATGACTATGCTAGAGCTTTTTATAATAGAATAGATGTTCAGAAGGCTCTCCATGGCAGTGACGGCCTCAGTCTCAAGAATTGGAGTATATGCAACGACAAGATATACCATAACTGGGTAGATAGAAAGCCATCTGTTATCCCAATCTACAAGAAGCTTATTTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGACACAGATGGTAGAGTGCCAGTTTTGTCCACGGAATACTGCTTAAATTCTCTCGGTTTAACTGTCACTAAGCAATGGAGTCCTTGGTACCATGAGAAGGAGGTTAGTGGGTGGCTTCAAGAGTACGAGGGACTAACATTTGCAACATTCAGAGGAGCTGGGCATGCAGTACCCTGTTTCAAACCAAGCAACTCACTGGCATTCTTCTCATCCTTTCTACTTGGACAATCCCCACCTTCTACAAAATAA 1497 0.4329 MWFSCFFIQLSLFELSNTDILLKMTIFCTFLAHMLLLSVKPVLASRHRQWSTSGRKLSSGYNGDLVTNLPGQPHVDFQHYAGYVTVNETNGRALFYWFYEAMSKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDNDGHGLKLNNFSWNREANVLFLESPVGVGFSYSNTTSDYDQLGDDFTANDAYNFLHNWFFKFPSYRNRTFYIAGESYAGRYVPELAELIHDRNDNPSLHIDLKGFLLGNPETSDMEDVRGIVDYAWSHAVISDETHETIRKTCDFKSGDPWSNENCSQAVDEVYRQYDNIDIYSLYTSVCFASTAGSKDQSMQALMKRSSKMMPRVVGGYDPCLDDYARAFYNRIDVQKALHGSDGLSLKNWSICNDKIYHNWVDRKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTEYCLNSLGLTVTKQWSPWYHEKEVSGWLQEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLLGQSPPSTK 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2448 498 Gene3D alpha/beta hydrolase 61 319 IPR029058 -
Glsi11g2448 498 SUPERFAMILY alpha/beta-Hydrolases 64 493 IPR029058 -
Glsi11g2448 498 FunFam Carboxypeptidase 397 491 - -
Glsi11g2448 498 Gene3D - 397 491 - -
Glsi11g2448 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 195 220 IPR001563 GO:0004185|GO:0006508
Glsi11g2448 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 169 IPR001563 GO:0004185|GO:0006508
Glsi11g2448 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 158 IPR001563 GO:0004185|GO:0006508
Glsi11g2448 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
Glsi11g2448 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 65 478 IPR001563 GO:0004185|GO:0006508
Glsi11g2448 498 ProSitePatterns Serine carboxypeptidases, serine active site. 209 216 IPR018202 GO:0004185
Glsi11g2448 498 Gene3D - 350 387 - -
Glsi11g2448 498 FunFam Carboxypeptidase 347 493 - -
Glsi11g2448 498 FunFam Carboxypeptidase 61 319 - -
Glsi11g2448 498 Pfam Serine carboxypeptidase 71 489 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2448 Glsi-ChrGlsi11 17260707 17264564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2448 355 492 Calmodulin-binding Proteins AT2G22960 33.094 9.39e-16 73.9