Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2445 ATGGATAGCACTGATTCATCTTCAGGCTCTCAGCACCTACAGCTCCCTCCAGGCTTTCGCTTTCACCCCACTGACGAAGAACTCGTCGTTCACTATCTCAAGAGAAAGGCAGCCTCTGCTCCCCTTCCCGTCGCCATCATCGCCGACGTTGATCTCTACAAGTTCGACCCTTGGGAGCTCCCAGGTAAAGCAGCTTTTGGTGAGCAAGAGTGGTACTTTTTCAGCCCCAGGGATCGGAAATACCCAAATGGGGCAAGGCCAAACAGGGCTGCTACTTCTGGGTATTGGAAGGCTACTGGAACTGATAAGCCTATATTAACCTCGGATGGCCGACTACAGAAAGTGGGAGTGAAGAAAGCTCTTGTTTTCTATGGTGGGAAGCCTCCAAAAGGGGTTAAAACCAACTGGATCATGCACGAGTATAGGCTCACTGAGAATCCTTATAGTTCTAGCTCAAAGCCTCCTCTGGCTGCTGATCCTTCACACAGTAACAAGAAAAACTCTTTAAGGCTTGACAATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAGTAACATCAATCTGCAAAGGCCACTATTGATGGAACAGGACAAGGAGCTCTGTATGGAGGCTATGCTACCCACAATCTCTTCCCTGTCAATGGCTAATAATACCCACCACCAAAATTCCAATCCTCCATCTTCGAGGAGCACAAGTTATGGTCCTGTACTGGGACTCGAGAATGATCATGACAACTTCTTTGATGGAATCCTAGCAGCAGCAGCAGCAGAACATCAAAGCATGCAAAATGGTTCTGATAATTCTCACCTAGTAGTCTCTTCCAACTCAAAGGGTAGTACTAGTGTTAACTTCCCTGTGAAACGAGCCTTTCCACCCCATCAGTTTTGGAATGATCAAACAGGGTCTCCTGGATCATCTTCTTCAAGCAAGAGATTCCATGGTGATCTTAAGAGTGGAAATAATACAGTTGATGAGGAAAACAATTCCTTTGTTTCTCTGCTAAGCCAGCTTCCTCCTCAGAGCACAACATTTCACCACCCTAACACGATTCTTGGGTCTGTTGGTGATGGAGTATTGAGGCAACAATTTCAACTCCCAAGCCTTAATTGGAACTCGTAG 1122 0.4626 MDSTDSSSGSQHLQLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIADVDLYKFDPWELPGKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSDGRLQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLTENPYSSSSKPPLAADPSHSNKKNSLRLDNWVLCRIYKKSNSNINLQRPLLMEQDKELCMEAMLPTISSLSMANNTHHQNSNPPSSRSTSYGPVLGLENDHDNFFDGILAAAAAEHQSMQNGSDNSHLVVSSNSKGSTSVNFPVKRAFPPHQFWNDQTGSPGSSSSSKRFHGDLKSGNNTVDEENNSFVSLLSQLPPQSTTFHHPNTILGSVGDGVLRQQFQLPSLNWNS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2445 373 FunFam NAC transcription factor 56 24 187 - -
Glsi11g2445 373 ProSiteProfiles NAC domain profile. 15 182 IPR003441 GO:0003677|GO:0006355
Glsi11g2445 373 MobiDBLite consensus disorder prediction 294 325 - -
Glsi11g2445 373 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Glsi11g2445 373 SUPERFAMILY NAC domain 10 182 IPR036093 GO:0003677|GO:0006355
Glsi11g2445 373 MobiDBLite consensus disorder prediction 216 236 - -
Glsi11g2445 373 MobiDBLite consensus disorder prediction 296 325 - -
Glsi11g2445 373 Gene3D NAC domain 24 187 IPR036093 GO:0003677|GO:0006355
Glsi11g2445 373 MobiDBLite consensus disorder prediction 259 278 - -
Glsi11g2445 373 PANTHER NAC TRANSCRIPTION FACTOR 56 15 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2445 Glsi-ChrGlsi11 17233206 17234546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2445 1 373 NAC Transcription Factor Family AT3G15510 50.886 1.00e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi11g2445 NAM 1.1e-39 No_clan