LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi11g2428	ATGATAAGATGCAGCAATACACAATGGCAAATGGCAACAAATTTACTGATCCAAGTGTGTCTTTCAAATGATGGCACAACCCTTTCAATCACAATTGTGCATAAACAGAGCTTGCAAAGAATATCAATGGCTTACAGACGTTGTCTCTTGATAAGAGGAAACCTCGTAGATCGAAAGTGCCACCCATCTTTGAGTTATGTTTTCCATAGAGATGAACATAAACGTGAATGGCAAGATGAAAAATTATCTGCAGCAGACGTTGGTAAATTTCTCCAAGAAAGGTCATTTGGAAGCTCTATGAAAAAATCAGTAAGGTTTGCTGCCTCTTCTCGAGACGGAATATGGTCAAACAGTTTCCCTGTTCCATGCTCTGGATATTCGTTCTGCCGATATATGTCGACAGAAATGAATCAGGGTTCAAATAATATTGAAATAATAAGTGATGTAGCAGATGTTCTCACCGACACAACCTTGGAGGCTGTAGCTTCCCAGGCTCCTATTGTTAATGAAGTTGTAATTGCTGCTGCTGATTCTTATCTACCTGTTAAAGCTTTGCAGTACTTGATAGATTCCGTGCATTCCTACATTGGTTTAAACTGGTGGGCAGCCATTGTTCTAACAACCCTCTTGATTCGAAGTGCAACACTTCCACTCTTAATAAATCAACTTAAGGCCACCTCTAAGCTTACACTAATGAGGCCTCACTTGGAGGACATTAAGCAACAGATGCAAGATAAGGCTATGGATCCCATGGCTGTCGCTGAAGGTCAGAAGCAGATGCAGAAGCTATTTAAAGAATATGGTGTGAGTCCATTTACTCCATTGAAGGGACTCTTTATTCAAGGTCCTATCTTTGTCAGTTTTTTCCTTGCGATAACAAACATGGCTGAAAAAATGCCATCATTCAAGAATGGTGGAGCCTACTGGTTCCTTGATCTTACCACTCCAGATAGCTTGTACATCTTTCCAGTTTTGACTGCTTTGTCTTTCTTAATAACAGTAGAGAGCAATATGCAAGAAGGCATGGAAGGAAATCCTGTTGCTGGCACCATGAAAAATGTCTCTAGGGTCCTTGCTGTTCTTACAGTTCCTTTTACCATGGGATTTCCGAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTGTGTATGGACTTGTGCTTAAAGTTCCTGGCGTCAAGAAAACATTAGGTGTTCCTGAAATACCTGCTGCAGCACCAACCAATGTCCCACAATCTAACTTTTCTTTCTTTCCAGTTCTAAAACAAGCTACATCAGCAAGAACCGAATCAAACTCATTGCCAGTTGAACAATCAAAACTTTCGGGTCAAAAGATATCGTCTGCCTCTATTATCAGTCAAAGGCTTAGAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAAAACAAGAAGAGCTGA	1428	0.3992	MIRCSNTQWQMATNLLIQVCLSNDGTTLSITIVHKQSLQRISMAYRRCLLIRGNLVDRKCHPSLSYVFHRDEHKREWQDEKLSAADVGKFLQERSFGSSMKKSVRFAASSRDGIWSNSFPVPCSGYSFCRYMSTEMNQGSNNIEIISDVADVLTDTTLEAVASQAPIVNEVVIAAADSYLPVKALQYLIDSVHSYIGLNWWAAIVLTTLLIRSATLPLLINQLKATSKLTLMRPHLEDIKQQMQDKAMDPMAVAEGQKQMQKLFKEYGVSPFTPLKGLFIQGPIFVSFFLAITNMAEKMPSFKNGGAYWFLDLTTPDSLYIFPVLTALSFLITVESNMQEGMEGNPVAGTMKNVSRVLAVLTVPFTMGFPKAIFCYWITSNLFSLVYGLVLKVPGVKKTLGVPEIPAAAPTNVPQSNFSFFPVLKQATSARTESNSLPVEQSKLSGQKISSASIISQRLRSLEKQVKGRKKNKKS	475

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi11g2428	475	NCBIfam	membrane protein insertase YidC	199	389	IPR028055	-
	Glsi11g2428	475	PANTHER	OXA1	154	467	IPR001708	GO:0016020\|GO:0032977
	Glsi11g2428	475	CDD	5TM_Oxa1-like	197	394	-	-
	Glsi11g2428	475	Pfam	60Kd inner membrane protein	200	389	IPR028055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi11g2428	Glsi-ChrGlsi11	17003609	17016157	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi11g2428	180	473	Chloroplast and Mitochondria Gene Families	AT2G28800	22.436	1.71e-07	51.6