Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2370 ATGGAAGAAGATACTAATTCTTGGATAAGGAGGACAAAATTCTCTCACACTGTGTGCCACCGATTGGACTCGTCAAGATTGGCCTCTATTCCTCTTCGCATTCATCCAGGACCTTCATCAGTTTCTTTCAATCTGAAGCCAGTTCCTGATGTTTCGAAGGTTCAGCGAAATCCTCTTACAAACAAGCCGAGATCTTTGTCCCCTTTTCCTGAAACCTTTATTTCTGAGACATTCAGGGAAGCTCGGTCTGAGCAAAAGAGGTTCTCAACCCCTGGTCCTAGGAGGAAAGAACAGAACAAGAGAATCATGGGGAAGTTAATGAATAAGGATTCTCGAGAGGTCAAGGCATCCAATTCGAAGTCGCCATCCAACAGTCCCATCAGGCACTTGGCATCGATGAAATCGAACGACAACATTAAGAATCGCAAGGAGTCAGCGTGGACAAAGTATTTTGACCATGGCGGGGGAAGAGTTACTGCTTTGGAAACTGCAGAAGAATGGACAGTTGACCTCTCTAAGCTGTTTCTTGGGCTTAGGTTTGCTCATGGGGCTCATAGCCGGCTTTACCGCGGTAACTATAAGGATGAACCTGTTGCTGTTAAACTGATCAGGGTACCAGATGAAGATGAAAGTGGAACCTTGGCTGCTCGATTAGAGAAACAATTCATTAGAGAAGTCACATTTTTATCTCGTCTCCATCATCAAAATGTTATAAAGTTCATAGCAGCATGCCGAAAACCACCTGTTTATTGTGTCGTCACAGAATATCTGTCAGAAGGTTCCTTGAGGGCGTACCTGCATAAGTTAGAGCGCAAAACTATTTCTCGTGAAAAGCTAGTAGCTTTTGCTCTAGATATTGCTCGTGGAATGGAATATATACACTCTCAAGGTGTCATTCATCGGGACCTTAAACCAGAGAATGTCATTATCAATGAAGAGTCCCGCCTCAAGATTGCTGATTTTGGCATTGCTTGTGAGGAGGCATACCGTGATGTATTTACCGACGACCCTGGCACCTACCGTTGGATGGCACCTGAGATGATCAAACGTAAATTCTATGGGCGAAAGGTTGATGTGTACAGTTTTGGGCTTATCCTATGGGAAATGGTGACTGGAACAATCCCATATGAGGATATGACTCCCATCCAGGCTGCTTATGCTGTAGTAAATAAGAATTTGAGGCCTGTTATTCCTTCAGACTGCCCACTTGCTTTGCGAGCGTTAATTGAGCAATGTTGGTCCTCGCAACCAGATAAGAGGCCTGAGTTCTGGCAGATTGTTAAGGTATTAGAACAATTTGAGTCTTCACTTGCCCTCAATGGAACTCTGAATCTTGTGCAAAACCCATGTTGCCAAGACCATAAGAAAGGGCTTCTTCATTGGATTCAAAAGCTTGGCCCTGTGCATCAAAATAATGGCCCTGTGCCGAAACCTAAGTTCACATGA 1446 0.4426 MEEDTNSWIRRTKFSHTVCHRLDSSRLASIPLRIHPGPSSVSFNLKPVPDVSKVQRNPLTNKPRSLSPFPETFISETFREARSEQKRFSTPGPRRKEQNKRIMGKLMNKDSREVKASNSKSPSNSPIRHLASMKSNDNIKNRKESAWTKYFDHGGGRVTALETAEEWTVDLSKLFLGLRFAHGAHSRLYRGNYKDEPVAVKLIRVPDEDESGTLAARLEKQFIREVTFLSRLHHQNVIKFIAACRKPPVYCVVTEYLSEGSLRAYLHKLERKTISREKLVAFALDIARGMEYIHSQGVIHRDLKPENVIINEESRLKIADFGIACEEAYRDVFTDDPGTYRWMAPEMIKRKFYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAYAVVNKNLRPVIPSDCPLALRALIEQCWSSQPDKRPEFWQIVKVLEQFESSLALNGTLNLVQNPCCQDHKKGLLHWIQKLGPVHQNNGPVPKPKFT 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2370 481 SUPERFAMILY Protein kinase-like (PK-like) 154 430 IPR011009 -
Glsi11g2370 481 CDD STKc_MAP3K-like 181 430 - -
Glsi11g2370 481 Gene3D Transferase(Phosphotransferase) domain 1 259 456 - -
Glsi11g2370 481 ProSiteProfiles Protein kinase domain profile. 174 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2370 481 MobiDBLite consensus disorder prediction 117 134 - -
Glsi11g2370 481 PRINTS Tyrosine kinase catalytic domain signature 292 310 IPR001245 GO:0004672|GO:0006468
Glsi11g2370 481 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672|GO:0006468
Glsi11g2370 481 PRINTS Tyrosine kinase catalytic domain signature 401 423 IPR001245 GO:0004672|GO:0006468
Glsi11g2370 481 PRINTS Tyrosine kinase catalytic domain signature 338 348 IPR001245 GO:0004672|GO:0006468
Glsi11g2370 481 PRINTS Tyrosine kinase catalytic domain signature 254 267 IPR001245 GO:0004672|GO:0006468
Glsi11g2370 481 MobiDBLite consensus disorder prediction 80 116 - -
Glsi11g2370 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Glsi11g2370 481 SMART serkin_6 174 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2370 481 Pfam Protein tyrosine and serine/threonine kinase 180 430 IPR001245 GO:0004672|GO:0006468
Glsi11g2370 481 FunFam serine/threonine-protein kinase HT1 259 452 - -
Glsi11g2370 481 Gene3D Phosphorylase Kinase; domain 1 162 258 - -
Glsi11g2370 481 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 117 435 - -
Glsi11g2370 481 MobiDBLite consensus disorder prediction 80 137 - -
Glsi11g2370 481 FunFam Serine/threonine-protein kinase isoform 1 164 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2370 Glsi-ChrGlsi11 16617301 16619528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2370 1 481 MAP Kinase Kinase Kinase AT5G58950 56.844 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Glsi11g2370 PK_Tyr_Ser-Thr 1.6e-62 CL0016