Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2369 ATGTTCCCTCGACGACCAAATGCAGAAAGGGAGAACGGGAATCCAGAACAGTGTGAAAACTCTGACGAAGGAAAGCTAGCTATCTATGAGGTTTATCCCTATCATCCTTTAAGTGGAGTGCTAGCTAGTCATTTCAATTCCCTATCGGCTTTTCAAGAGCTAGTATTGATGGAGAACAACCCTAGTTCTTCCAGAACTGATAGAAAGTTCATTGAGAGGAATAGAAGAAATCAAATGAAGGCTCTTTACTCCAAGCTCAACTCTCTTGTACCTCATCAAAGCTCAAGGGAGGTAATTTCCCTGCCGGATCAGCTACACGAAGCCACGAACTACATAAAGAAGTTGCAGATGAAACTGGAGAAAATGAAGGAGAAGAAAGATAGCCTAATGGGGTTTGAAAACTCAAATGGGAGCGTAAATAGAGGAAAGGTTCTGGGGTTAAAATCACCAGAAATTGAGATTCGGCAAATGGGTTCAGCTTTAGAGATTGTTGTCATAACTGGGTTGGATTGTCAGTTTATGTTCAATGAGATTATTCGTGTTCTTCACGAAGAAGGAGCTGATATTGTTCATGCTAGTTATACAGTTGTTGAAGATGCAGTTTTTCACACAATACACTGTCAGGTAGGGGAATCCTCTAACGGAGCTGCGAGGATATCGGAGAGACTAAAGAGGTTTTTGTATGGTTCTGATGCAATTTAA 702 0.4117 MFPRRPNAERENGNPEQCENSDEGKLAIYEVYPYHPLSGVLASHFNSLSAFQELVLMENNPSSSRTDRKFIERNRRNQMKALYSKLNSLVPHQSSREVISLPDQLHEATNYIKKLQMKLEKMKEKKDSLMGFENSNGSVNRGKVLGLKSPEIEIRQMGSALEIVVITGLDCQFMFNEIIRVLHEEGADIVHASYTVVEDAVFHTIHCQVGESSNGAARISERLKRFLYGSDAI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2369 233 MobiDBLite consensus disorder prediction 1 21 - -
Glsi11g2369 233 Coils Coil 105 125 - -
Glsi11g2369 233 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 60 227 - -
Glsi11g2369 233 Pfam Helix-loop-helix DNA-binding domain 65 116 IPR011598 GO:0046983
Glsi11g2369 233 MobiDBLite consensus disorder prediction 1 18 - -
Glsi11g2369 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 63 115 IPR011598 GO:0046983
Glsi11g2369 233 Gene3D - 57 139 IPR036638 GO:0046983
Glsi11g2369 233 FunFam Transcription factor bHLH162 57 141 - -
Glsi11g2369 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 61 130 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2369 Glsi-ChrGlsi11 16601945 16610034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2369 59 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 48.889 3.79e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi11g2369 HLH 2.3e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2369 11 16601945 16610034 Glsi11g2369 11 16601945 16610034 CCT