Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2368 ATGAAGGCCCTTTTCTCCGAGCTCAACTCTCTCCTGCCTCATCAAAGCTCAAGGGAGGTGATTTCACAGCCGGATCAGCTAGATGAAGCCAGGAAATACATAAAGAAGTTGCAGATGAATCTGGAGAAAATGAAGGAGAAGAAAGATAGCCTAATTGGGATTGAAAACCCAAATGGGAGCGTAAATAGAGGAAAGGTTCTGGGGTTAAAATCACCAGAAATTGAGATTCGGCAAATGGGTTCAGCCTTAGAGGTTGTCATGATAACTGGGTTGGATTGTCAGTTTATGTTCAATGGGATCATTCGTGTTCTTCATGAAGAAGGAGCTGATATTGTTCAAGCTAGTTATAACGTTGTTGAAGACGCAGTTTTTCATACAATATACTGTGAGGTAGGGGAATCCTCTAACAGAGATGCGATATTATCGGAGAGATTGAAGAGGTTTTTGGATGCTAGTAAGCAACTTCATATCCTGCTGGATTCACTGAAGCTGATCTCATATTGTTATGCTCTTCCCATTGTAATAGACAAAAGCACACCAGAATTCTAG 549 0.4117 MKALFSELNSLLPHQSSREVISQPDQLDEARKYIKKLQMNLEKMKEKKDSLIGIENPNGSVNRGKVLGLKSPEIEIRQMGSALEVVMITGLDCQFMFNGIIRVLHEEGADIVQASYNVVEDAVFHTIYCEVGESSNRDAILSERLKRFLDASKQLHILLDSLKLISYCYALPIVIDKSTPEF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2368 182 Gene3D - 1 57 IPR036638 GO:0046983
Glsi11g2368 182 Coils Coil 27 54 - -
Glsi11g2368 182 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 51 IPR036638 GO:0046983
Glsi11g2368 182 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 37 IPR011598 GO:0046983
Glsi11g2368 182 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2368 Glsi-ChrGlsi11 16582735 16585489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2368 1 151 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 44.444 1.02e-37 127